UFO04338.5prime Sequence
929 bp (337 high quality bases) assembled on 2009-02-18
> UFO04338.5prime
CAATCCACATGGACAAAAACCATCGCCTCGTGGTCTACCACTGCAACATT
GGGACCGATGATGCCTGGGGATTGGCCATGTTGCTGCGCGCGGAGGAGCT
AACTCTGCGCGAAGGAAGGACCTGCAAAGTGTTGGCCATAACAACGGTGC
ATGGCAACACGGATGCGGACAATGGAACACTGAATGCCCTGCGGGTGCTG
CACACGTTGAACAGGCGCGATGTTCCGGTCTTTAGGGGCTGTTACGAATC
CATATTGCCACGCACTTGGGAGTATACCAACTGTTTCCATGGCCAAGATG
GCCTAAACGATGTGGGCAACTATCCTGTGGTCGATGTGGAGCAGGAACTG
CTACCGGAACACGCTGTCCATGCCATGTACCGCCTGGCCAGAGCTAATCC
CGGCCAAGTGGACTTTCTGCTGTGCGGACCACTTACCAACTTTGCCAACT
GCATCATTTTGTATGGAAACTCATTTCTGACGAACATTGGTCGAGTCTAT
ATAATGGGTGGCAACATATTCGGCAAGGGTAATGTCACGAAAAGTGCCGA
ATTCAATTTCATGATGGATCCCGAGGCGGCGCACATTACCCTGAAGCGTC
TGCTGGAACCGGCGATCATCCTGCCCTGTGAGCCCTGCATCGATGGAGAG
TTCGACACCACCCTCGACTGGCTACTGAATGTCCTCGGAGCGGTTGATCA
TCCCTTTATAGAACTACTCACACGCGTGTAACGCTCCATGCTGGATCCGC
GAGGATTCGTGAAGTGCATCAGATGTGATTCCATACTCTACGTCGCCTAT
CTCTCCCCGATGCGATGATCTCCGACAACGGCAGTACTGCGCCACGTGTG
CTGAGTGTATCCACTGCGTGGCAGATGGTGCTGATCACCTGCGCGTCGGA
AGTGACACATCTGGTTATGAAATAATGTG
UFO04338.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11158-RA | 1608 | CG11158-RA | 23..919 | 7..895 | 3835 | 95.8 | Plus |
| CG5418-RA | 1196 | CG5418-RA | 424..602 | 405..583 | 230 | 76.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13683246..13683871 | 222..845 | 2700 | 96.2 | Plus |
| X | 23542271 | X | 13682974..13683190 | 7..223 | 1025 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:19:57 has no hits.
UFO04338.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:05 Download gff for
UFO04338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 62..882 | 1..820 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:37 Download gff for
UFO04338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 17..837 | 1..820 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:57:41 Download gff for
UFO04338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 17..837 | 1..820 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:57:41 Download gff for
UFO04338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13682968..13683188 | 1..221 | 97 | -> | Plus |
| X | 13683246..13683845 | 222..820 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:37 Download gff for
UFO04338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13577001..13577221 | 1..221 | 97 | -> | Plus |
| arm_X | 13577279..13577878 | 222..820 | 96 | == | Plus |
