UFO04342.5prime Sequence
1157 bp (1050 high quality bases) assembled on 2009-02-18
> UFO04342.5prime
CAGTCGACATGAAAGCCGTGATCTTTGTGCTCGCCGTCGTGGTAGCCATG
GCCGGAAAAGCCCACGCCGCATGCTCCGCCGTTCCTCAATATACGGAAAA
GATCGATCCTGTCAATTGCCCACAGTCAGGATTCAAGTTGCCCAACTATG
AGAACGCCTCCGTGTACTACCAGTGCACCGCACAGTTACAGTCCGATGGC
AGCATAGTGGTGACTGGCGTCTTGACCAGCTGCGGTGAAGACACCTACTT
CAACTATGCCTTGCAGAGATGCGTGGCCTGCGCCAATTACTTCCCAAGCG
CCCAGTGCAGCAGTCTGCCCATCAATGTGACCTGTGTGCCCATCTCCACC
GTTACCACTGTGGCCCCCACAACCGGAACCACCATTGCTCCCACCACCGC
GTCCCCCACTACCGCTGCTTCCACCACTGCGGCACCTGGCGAGTCCACCA
CTGCAGCACCTGGCGAGTCTACCACCGTCACGGTGCCCGTACCACCAACT
GAAGCTCCTGGCAGCACCACGGCCTCCGGCAGTGACGACATCATTACCCC
GACTGGTACCACCATCTCCGTGCCCCAGCCCCCCTCACCCAGTGACAGCA
ACGTGCCCACTCCGGTGACGCCCGCGCCCACAGCTCCTGTCATCAACGAC
GGTCCTCCGACCGCACCTTCGGCTGCCACCAAAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAA
GCGAGCTCGATATCAAATTACGCCCCGCCTGCACTCATCGCAGTACTGTT
GTAATTCATAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACTGATCGCAGCGGCATCAGCACCTGTCGCTGCGTATATATTTGCCAT
GAGGAAACGGGGCGAAGAAGTTGTCAATGCACGTTTAATCAACTGGGTGA
ACTCACCAGGATGCTGAACGAAACAATTCTCATACTAGAATTGCAATTCC
GTAACGC
UFO04342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7714-RA | 953 | CG7714-RA | 81..757 | 7..683 | 3385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18725595..18726260 | 683..18 | 3330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:02 has no hits.
UFO04342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:02 Download gff for
UFO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 76..765 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:06 Download gff for
UFO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 76..765 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:23 Download gff for
UFO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7714-RA | 76..765 | 1..694 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:23 Download gff for
UFO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18725587..18726263 | 12..694 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:06 Download gff for
UFO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14551309..14551985 | 12..694 | 98 | | Minus |
