UFO04352.5prime Sequence
1131 bp (1011 high quality bases) assembled on 2009-02-18
> UFO04352.5prime
CAGTCGACATGTCCAAGTATTCGAAGCTGGCCCGCGGGTTCTGCGACCTG
CTGATCTGGGTGGCCCTCAGCGTGGCCAGTGTGCTGCTCCACAAGATGGG
GCGTCCCTTCCGGCGCGGCTTCTTCTGTGGCGACGAGACCCTCAGCTATC
CAGCGCGCGACGGCACCATCAGCTCCAAGGTGATCATCGCCATCGTCCTC
GGAGTGCCCAACGCCGTGATCGTAGTGGTGGAGTTGTTTAGGCAGCTGCC
CGGTGGGCCGCTTAGAGAGGCGGGCGGTAAGCGGGATAGCTGCCGGATAG
CCCACCGCCTCGGGGTCCTTTATCGCCAGGTTATCTTCTACCTGTACGGC
CTCGCCATGGTCACGTTCACCACGATGCTGACGAAGCTGTGCCTCGGGCG
TCTGCGACCGCACTTCCTCGCCGTGTGCCAGCCCATGCTGCCGGACGGAA
GCAGCTGCCAGGACGCCCAGAACCTGGGACGCTACATAGACAGTTTTACG
TGCAGCAACGCCAACATGACCGACTACCAGTTCAAGGAGCTCTACCAGTC
CTTCCCAAGCGGCCACGCCAGCATGGCCATGTATGCTATGCTCTACCTGG
CCATCTACCTGCAGGCGGCGCTCAGTACGCGCGTCTCCAAGCTGCTGAAG
CATCTGCTGCAGTTCCTCTTCGTCATGTTCGGCTGGTACGTATCGCTGAC
TCGGATCATCGACTATTACCACCACTGGAGCGACGTCCTGGCGGGGGCGG
CATTGGGCGTGGTGTTCGCTTGGCTGACGAGTGCCTATGTGGCCGACTTG
TTTGCCGGCAAGCGGTGGCCGAAGACTGGCTACTCGGCCAACACGCTGCG
CAAGCCGCAGTCTCGCCGAAGAGCTCCACAGTCGCAGCGGAGGATCCACG
TCGGGAGCGGGTCAGCCGCCCGCTCTGCCGCCTATACTTTGGAACGCTGC
CCTACTGGCGCACATCCCGCACAGGCGCAGCGCAGTACGCCAGCCTATCA
CAACTACGCTACGTGCCGCAAGCTTTCTAGACATCGCGTTGGCGCGCCGG
CCAGTTATGGTCTTATCTATCTATCTATTCTTATTCCACTAGCTAGGAAA
TCTGGTATGGACTATGGCTGATTCCAAATAA
UFO04352.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11438-RB | 2458 | CG11438-RB | 1291..2314 | 8..1018 | 4805 | 98.7 | Plus |
| CG11438-RA | 1245 | CG11438-RA | 78..1101 | 8..1018 | 4805 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22466909..22467932 | 8..1018 | 4530 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:44:59 has no hits.
UFO04352.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:54 Download gff for
UFO04352.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..1107 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:02 Download gff for
UFO04352.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..1107 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:45 Download gff for
UFO04352.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..1107 | 1..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:45 Download gff for
UFO04352.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22466905..22467938 | 1..1024 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:02 Download gff for
UFO04352.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22460005..22461038 | 1..1024 | 98 | | Plus |
