UFO04356.5prime Sequence
1130 bp (1040 high quality bases) assembled on 2009-02-18
> UFO04356.5prime
CAGTCGACATGGCGATTGCGCAGGCGCGCAGGTCACTCATACGCCATGGA
CGCAGTGGTGGCGGCAAAAAGGGGATTAAGATATATATGATGATTTTCCT
GACTAACCACTTTAGATCTTTGGCTACTTGGTTGTCACCTTACATCCCGT
TTTTAATGATCCCCTCTAATATTTTTTGCATTTGCCACTGCTTGCAAGTG
ACAAACACAACTGTACCTTCAATGGTGTTCAACTGTAGTTGTATTTACCG
CCGTTATGGTGATTTGTCAGCAATTTTTAGCATGATTAATGAATGTTTCA
ATCCGGCGACACAACTCCCTCTTCCTCCAACCCACCGCTTTGTTAGCCGA
AATTCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCG
AAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCAC
CCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGA
AATAGGCCAGGTTTCACCGTACACGCCACATCTTGCGATATATGTGTAGA
AACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAG
TTTGCTCATGGAAACCGTGTAACAGGTGACACTATCCCATATCACCAGCT
CACGTCTGCATGCCTACGAAATTCCGATGAGCATCATCAGGCGGGCAGAA
TGTGATAAGGCCCGATATACCTGTGCTATTTTTCTTTACGGGCCTTAAAG
GCCGAATATCCACTGACGGCCTGTTTAAGC
UFO04356.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:25:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16310066..16310413 | 9..356 | 1725 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 19:25:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 182..110 | 115 | 63.5 | Minus |
UFO04356.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:52 Download gff for
UFO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32160-RA | 881..1233 | 1..356 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:18 Download gff for
UFO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16310061..16310413 | 1..356 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:18 Download gff for
UFO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16310061..16310413 | 1..356 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:00 Download gff for
UFO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16303161..16303513 | 1..356 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:00 Download gff for
UFO04356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16303161..16303513 | 1..356 | 98 | == | Plus |
