UFO04365.5prime Sequence
1137 bp (1018 high quality bases) assembled on 2009-02-18
> UFO04365.5prime
CAGTCGACATGAACTCAACTCTGGTGATTCTACTTCTTTCGGCTCTGGCT
TTGGTGCAGGCCAGGAATATTCGTTGGTCTGAGGAGGACAACTCGTCCCA
AGGTCCAAGTCTAAGCCACCCGCATCCGCACTCTGTCAACTGGCCCTGTG
ATGTGGGTCACTTCCCAGAGGCATTCATTCTAATGCACAAGGTGGATAAG
CGACTGGAACGAATTGACAACGAGAGTACCAAGAAACGGATCGAGAACTA
CGCCGTCAATCAGTTGAGGCAGTGCATCTTGGATGGCCAGATGGACGTGC
ACTGCGTTAGGCGTTCGATTGGATACACCATGTCATTCATTCACCACCAA
ATGAGCCAGGCGAATGGAATGGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAA
TAAACTCTTTAGGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTT
GCGATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGA
GCGATGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTACAAGGTGAACA
CTATCCCATATCACAAGCTCACGGTCTCAATGCATACGAAATCGATGAGC
ATTCATCAGGCGGGCCAGATGTGAATAAAGCGATAACTTGGCCTATTTTC
CTTACGCTTAAAAGGGTAATCACTAACGGTTGTTAAG
UFO04365.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fit-RA | 531 | CG17820-RA | 24..386 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21884069..21884431 | 371..9 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:11:44 has no hits.
UFO04365.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:45 Download gff for
UFO04365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fit-RA | 17..392 | 1..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:54 Download gff for
UFO04365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fit-RA | 17..392 | 1..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:13 Download gff for
UFO04365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fit-RA | 17..392 | 1..378 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:13 Download gff for
UFO04365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21884069..21884438 | 1..371 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:54 Download gff for
UFO04365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17709791..17710160 | 1..371 | 99 | | Minus |
