UFO04366.5prime Sequence
1136 bp (994 high quality bases) assembled on 2009-02-18
> UFO04366.5prime
CAGTCGACATGCGCCGCAACAACTACCCGTACCAGCCCCTAAACCAGCAC
CCTTCAGGGCCCCATCCTGCGAGCCACGACGCCTTGGAGGCGGAAAACGA
GCAGGCGGCGGAGGAGTTGAAGCAGAAGATCGGGGCCCTGAAGTCCCTCA
CCATCGATATAGGCAATGAGGTGCGCTACCAGGACAAGCTGCTGCGCGGC
ATCGACGACGACATGGACCGGACGAGTGGATTTCTGGGCAACGCGATGAC
GCGGGTGGTGCGACTGGCCAAACAGGGCGGTGGTGCTCGCCAAATGTGCT
ACATGTTCCTCTTCATCCTCGTCGTGTTCTTAATCCTCTGGATAACCCTA
AAGTTTAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACT
CACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTAAG
GAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGT
GTAGAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGT
TTCAGTTTGCTCATGGAAACGGTGTACAAGGGTGACACTATTCCCTATCC
ACAGCTCACCGTCTTTCATTGCCATCGAAATTCCGATGAGCATCATCAGC
GGGCAGATGTGAATAAGGCCGATAAACTGGGCTTATTTCTTACGGCCTTA
AACGACCCGAATTCACTAAACGCTGTATAGTACATT
UFO04366.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bet1-RB | 987 | CG14084-RB | 300..650 | 9..359 | 1755 | 100 | Plus |
| Bet1-RA | 656 | CG14084-RA | 252..602 | 9..359 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19261750..19262100 | 9..359 | 1755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:44:56 has no hits.
UFO04366.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:44 Download gff for
UFO04366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14084-RB | 273..632 | 1..367 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:01 Download gff for
UFO04366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bet1-RA | 248..607 | 1..367 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:44 Download gff for
UFO04366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bet1-RA | 248..607 | 1..367 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:44 Download gff for
UFO04366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19261746..19262100 | 1..359 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:01 Download gff for
UFO04366.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19254846..19255200 | 1..359 | 98 | == | Plus |
