UFO04370.5prime Sequence
1095 bp (992 high quality bases) assembled on 2009-02-18
> UFO04370.5prime
CAGTCGACATGCAGCTAACCGGTGCCTCTATGTTCCTCGTATGGGTGGGT
CTACTCAGCTGGGTTTCCTGCAGAGTGGACGCCTCCGAAGGATTTCCATC
GCCGCTGAAGCGCTGCAAGCTCCAGGATGAGTCGTGCTTGCTGGCTCAGG
CGCAAACCTTTTTCCAAGCCTTCAAGAATGGCATTCCGGAGCGGCAGGTG
GCCGCGCTGGAGCCCATTGCCCTGGGCACGATGTTCATCGAGAGCGGCGG
CCACTCGGAGTCGATAAAGTTCAAACTGACCATGAGCGATGCCAAGCTCT
ACAATCTGGCCAACTCGATGATGGTCAAGAGCCTGAAGGGATTCACCAAG
GACCTCACCAGGCCGCTCAAGCTGACCCTGCTCTTGGACAATCCGGAACT
GGAGGTGCGGGCCAAGTACGACGTAGACGGCAAGCTGCTCATCCTGCCCA
TTGTCAGCAAGGGCGACCTGACCATTCGGTTGAACGATGTGCACACAAAG
GTTTGGATTACCGCCGAGCCAGTGAAGCGCTCCGATGGCCACACCTATCT
CAACATCACCGACTACAAGACGGCCACCAAGATCAAGGGTGGCCACTTTG
ACCTGTCGAATCTGTTCAACGACAACAAGGAGCTGCGCGACAGCACGCTG
AAGGTGCTGAACCAGGAGTGGAGCACCCTGGCCCTCGATGTCCAGCCGAA
GATCAACGAGGCCTGCGCCAAGGCCTTCAGTGCCATCGTACAGAGTCTGT
GGGCCAACATTCCCTACGACGAGTTCTTCGAAAAGGAAGCAAGCTTTCTA
GACCATTTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTTG
AACAATTCAGATGGAGTTCTGAGGTCATTTACTGGATTTATCAAAGAGTC
CAAGACGAGCCTCGATATTCAATTAGCCCCCGCCCTTGCCACTCATCGCA
GTTACTGTGTGTAAATTTATTTAAGCATTTCTTGCCGCCCTTGGA
UFO04370.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2650-RA | 1013 | CG2650-RA | 67..846 | 9..788 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2693156..2693648 | 589..97 | 2465 | 100 | Minus |
| X | 23542271 | X | 2692899..2693098 | 788..589 | 1000 | 100 | Minus |
| X | 23542271 | X | 2693733..2693820 | 96..9 | 440 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 21:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3197..3238 | 770..811 | 129 | 78.6 | Plus |
UFO04370.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:51 Download gff for
UFO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:30 Download gff for
UFO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 9..792 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:35 Download gff for
UFO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 9..792 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:35 Download gff for
UFO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2692895..2693097 | 590..792 | 99 | <- | Minus |
| X | 2693156..2693648 | 97..589 | 100 | <- | Minus |
| X | 2693733..2693820 | 9..96 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:30 Download gff for
UFO04370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2586928..2587130 | 590..792 | 99 | <- | Minus |
| arm_X | 2587189..2587681 | 97..589 | 100 | <- | Minus |
| arm_X | 2587766..2587853 | 9..96 | 100 | | Minus |
