UFO04395.5prime Sequence
1091 bp (968 high quality bases) assembled on 2009-02-18
> UFO04395.5prime
CAGTCGACATGTTCAAATACTTCGTTTTCGCCGTTTTCTGCCTGGCCAGC
GCTGCTGCTGCTCCTGGCTATTTGGGCGGATTAGCTGCTCCGGCCTTGCC
GCTGACTGCAGCTGCTCCGGCCATCTCCTATGGACACGCCTTGGCTGCTC
CCTCGATTGCCTCTTACGGGCTGGCCCCCAGGCTTAGCTATGCCGCCCCG
GCCTTGGCGCACGCTCCTCTGGCTGCTCCGGCCCTTTCCGCCTACGGATT
GGGATATGGTCCCGGTCCCATTGGCCTGGCTCATGGTCCTTTGGGACTAG
CTCACGCCCCTCTGGCCGCTCCCTTGGGATTGGGCTACAAGTCGGCATAT
CCTACTCTGGGTGCTCCTCTGGGACTGGGCTACAAGACAGCTCTTGCTGC
TCCTGCCTATGGACTCGCTCATGGATGGGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TCTCAATAAACCCTTTAGGAAATAGCCAGGTTTCACCGTACACGCACATC
TGCGAATATATGTGTAGAACTGCGAAATCGTCTGTATTCACTCAGAGCGA
TGAAACGTTCAGTTTGCCTCATGAAACGGTGTTACAGTGAACACTATCCA
TATCACCAGCTCACGGTCTTTTCATTGCCATTCCGAAATTC
UFO04395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13065-RA | 677 | CG13065-RA | 53..472 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16277560..16277975 | 13..428 | 2050 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:52 has no hits.
UFO04395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:37 Download gff for
UFO04395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 55..477 | 9..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:50:10 Download gff for
UFO04395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 53..475 | 9..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:29 Download gff for
UFO04395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 53..475 | 9..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:29 Download gff for
UFO04395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16277568..16277975 | 21..428 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:50:10 Download gff for
UFO04395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16270668..16271075 | 21..428 | 100 | == | Plus |
