UFO04403.5prime Sequence
1088 bp (1025 high quality bases) assembled on 2009-02-25
> UFO04403.5prime
CAGTCGACATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGGTCC
GCTCTCGCCGAGCGCGTGCCCGCCAACCAGAAGAGCAGCTTCGGCGCCTT
CAAGACCAAGTCGGACATCTATGTGCGCGCCGTGCTGGCCAATCCCGAGT
GCCCACCCCAGATCGATTGGGCCAACTACAAGAAGCTTGTGCCAGTGGCC
GGACTCGTCGATAGCTTCCAGAAGCAGTACGAAGCCCTGAAGGTGCCCTA
TCCCCAGGACAAGGTGTCGTCCCAGGTGGATGCCGAGATCAAGGCGTCGC
AGAGCGAAATCGATGCCTACAAGAAGGCCTCGGAGCAGCGCATTCAGAAC
TACCAAAAGGAGATCGCCCATCTCAAGTCTCTGCTGCCCTACGACCAGAT
GACCATGGAGGACTACCGCGACGCATTCCCCGATAGCGCACTCGATCCCC
TCAACAAGCCTACCTTCTGGCCCCACACTCCCGAGGAGCAGGTCGGCTAC
AAGTCCAAGGAGCAGCTGGAGGCCGAAGCCCAGGGACACCACGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATATATTTGCCCATGGTGAAAACGGGGCGAAGAAGTTGTCCATATT
GCCCGTTTAAATCAAAACTGGTGAAACTCCCCCAGGGATTGCTGAAACGA
AAAACATATCTCATAAACCCTTAAGGATCGCAAGTTCACCGTACACGCCA
CATCTGCAATATGTGTAGACTGCGATCGTCTGATCCTC
UFO04403.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-d-RC | 950 | CG6030-RC | 88..621 | 9..542 | 2655 | 99.8 | Plus |
| ATPsyn-d-RA | 734 | CG6030-RA | 88..621 | 9..542 | 2655 | 99.8 | Plus |
| ATPsyn-d-RB | 694 | CG6030-RB | 35..568 | 9..542 | 2655 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19095409..19095942 | 9..542 | 2655 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:48:01 has no hits.
UFO04403.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:25 Download gff for
UFO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-d-RB | 28..573 | 1..546 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:23 Download gff for
UFO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-d-RB | 39..584 | 1..546 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:48 Download gff for
UFO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-d-RB | 26..571 | 1..546 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:48 Download gff for
UFO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19095400..19095942 | 1..542 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:23 Download gff for
UFO04403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14921122..14921664 | 1..542 | 99 | == | Plus |
