UFO04410.5prime Sequence
769 bp (676 high quality bases) assembled on 2009-02-25
> UFO04410.5prime
CAGTCGACATGGGCTCCGACGACCAGAGTGCCGGGGACAGGATCCAGAAG
GGATTCCAGATCAACTATATGATTCTGCGGGATGCCGACAGCGGAAAAAT
AATCTGGCAGGAGAACAAGGACTTCTCGGCACCGGACCAGGAACATGAGG
CCCGAGTGCCGGTGAAAATACTCGACATGCGTGCCGTTTCCCGGGAGATC
AACTTCAGCACCATCGAGTCGATGGAGAACTTTCGCCTGGACCAGAAGGT
GCTCTTCAAGGGCCGCATCATGGAGGAGTGGTTCTTTGAGATGGGATTCG
TGGGTGCCAACACCACCAACACCTGGCAGTCGACAATCGAGGCGGCACCC
GAATCCCAGATGATGCCTGCCAAGGTCTTGAACGGCAATGTGACTATCCA
AACCAGTTTCTACGACAACGAGACACTCATCACCAAATCGGTTGTGCGCC
TGTACTACATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCCACCAATAAAAAAC
GCCCGGCGGCACCGAGCGTTCTGAACAAATCCAGATGGAGGTTCTGAGGT
CATTACTGGATTTATCAACAGGAGTCCAGCGGAGCTCGATATCAATTACG
GCCCCGCCTTGCACTCATCCCGAGTACTGTGTGAATTCATAAGCATTCTG
GCGACTGGAGCCACCAACG
UFO04410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PrBP-RA | 1133 | CG9296-RA | 153..605 | 9..461 | 2250 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8685351..8685803 | 461..9 | 2250 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:02:40 has no hits.
UFO04410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:30 Download gff for
UFO04410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9296-RA | 147..609 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:13 Download gff for
UFO04410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PrBP-RA | 148..610 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:53 Download gff for
UFO04410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PrBP-RA | 148..610 | 1..467 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:53 Download gff for
UFO04410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8685346..8685808 | 1..467 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:13 Download gff for
UFO04410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8685346..8685808 | 1..467 | 98 | | Minus |
