UFO04418.5prime Sequence
1126 bp (1011 high quality bases) assembled on 2009-02-25
> UFO04418.5prime
CAGTCGACATGCTTAAGCTATGGCTAATATGTATCTTGACTGTCAGCGTG
GTCTCCATACAGAGTCTCTCACTTCTGGAGGAAACCAATTACGTGTCAGA
TTGCCTGGCCAGCAATAACATCAGCCAGGCTGAATTCCAGGAACTCATCG
ATCGCAACAGCTCCGAAGAGGATGACCTCGAGAATACCGACAGAAGATAC
AAATGCTTCATCCATTGCCTAGCGGAGAAGGGAAATCTTTTGGATACCAA
TGGCTATTTGGATGTGGATAAAATTGATCAAATTGAGCCCGTGAGCGATG
AACTGCGAGAGATACTCTACGATTGCAAGAAAATCTACGATGAGGAAGAA
GATCATTGCGAATATGCGTTTAAGATGGTGACTTGTCTAACTGAAAGCTT
CGAGCAGAGCGATGAGGTCACCGAAGCGGGTAAAAATACAAACAAATTAA
ACGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCGTCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAACATATTCTCATAAACCCTTTAGGAAATA
GCCAGGTTTTCACGTACACGCCACATCTTGCGAATTTATGTGTAGAACTG
CCGGAAATCGTCGTGGTATTCACTTCAAGGCGATGAACGTTTCAGGTTTG
CCTCATGGAAACGGTGTACAAGGTGAACACTTTTCCCTTATCACCAGCCT
ACCGTCTTTTCATTGCATAGATTCGG
UFO04418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57c-RA | 557 | CG13421-RA | 84..530 | 9..455 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20503781..20504175 | 61..455 | 1975 | 100 | Plus |
| 2R | 25286936 | 2R | 20503667..20503720 | 9..62 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:25 has no hits.
UFO04418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:18 Download gff for
UFO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RB | 53..502 | 9..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:09 Download gff for
UFO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RA | 84..533 | 9..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:55:39 Download gff for
UFO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RA | 84..533 | 9..459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:55:39 Download gff for
UFO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20503667..20503720 | 9..62 | 100 | -> | Plus |
| 2R | 20503783..20504175 | 63..455 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:09 Download gff for
UFO04418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16391172..16391225 | 9..62 | 100 | -> | Plus |
| arm_2R | 16391288..16391680 | 63..455 | 100 | == | Plus |
