UFO04435.5prime Sequence
1122 bp (1001 high quality bases) assembled on 2009-02-25
> UFO04435.5prime
CAGTCGACATGTTGCTCCAATTGAGGCGATTGGCGATCCTGTTCCTGCTC
CACGCTCTCATCCCCATCCTTGCGCTATCTGTTCCCATGGTGGAGCAAGT
GCAGCCGGCGGACGAGCTGCTATCGTCGCATTGGCTAAGACAGGCGCAGT
CTCAGTTGCGCGAACGTCTGGCCAGAACCAAGGACTCCATCGCCGACGTC
CGACAGGCCAAGAATGTGGTGATGCTCCTGGGCGATGGACTGTCCATCAC
CACCTTAACGGCCGCTCGCATCCTAAAGGGGCAACGTCGCGGCGGACGCG
GAGAGGATGCACAGCTGGCCGTGGAACAATTCCCCTTCAGCGGACTGAGC
AAGACATACTGCATCGACGAGCAGACACCGGACTCCGCCTGCACGGCCAC
CGCCTATTTCGGCGGTGTGAAGACGCACAGCGGCACAGTGGGTCAGAGTG
GCAGTGGTGAGCGCGTGGACTCCGTACTCCAGTGGGCACAGCGAGCGGGC
AAGGCCACGGGAGTGGTGACCACCACCCGTTTGACGGACGCCAGTCCGGC
TGGTGCCTACGCCCATGTGAGCAGGCGTGGCGAGGAGCTGGAGATTGCGC
GACAGCTGGTGGAGGAGGAGCCGGGACGGAATCTTAATGTCATCCTGGGC
GGTGGTCTGGGAAAATTTGCCGATGAGCGACGGGATGGCAAGGATCTGCT
GGCTCAGTGGCGTGAATCGAATCCCAATGGCTGCTTCTCGCGATCCCTGA
AAGAGCTGAGGAACTGCACCGATGCTACCGGTACACTGCTGGGTATCTTC
AGCGACAGCCACATGTCATATCACTTGGCCGCCAGCAAGGAGCTGCCGCG
ACTCTGCGACATGGCAGCGGCGGCCATTGAAAACTGGAGAGAAAGTCTCA
GAGATGGGAATGGTTACTTCGTGTTCATTGAGGCGGACGGATGATCATGG
ACACCACGAAACCCGGTGGCTACGCCCTCGATGAGATGTCGAGTCGATGC
GGCTGGTGGAGACGGTGATCAGATGACCGATCCCGCGCCGATACTCTGTA
TGTCACCGCCCGATCTCCCATCGCTAACATGTCGATACCGCGAAACGGGG
CACACCCTCATTCCTTGGCCAT
UFO04435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8105-RA | 1569 | CG8105-RA | 50..1169 | 2..1107 | 4955 | 97.3 | Plus |
| CG3292-RA | 1713 | CG3292-RA | 443..537 | 330..424 | 190 | 80 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15587782..15588822 | 2..1033 | 4655 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:31 has no hits.
UFO04435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:13 Download gff for
UFO04435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8105-RA | 48..1090 | 1..1033 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:50 Download gff for
UFO04435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8105-RA | 48..1090 | 1..1033 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:09 Download gff for
UFO04435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8105-RA | 48..1090 | 1..1033 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:09 Download gff for
UFO04435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15587780..15588822 | 1..1033 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:50 Download gff for
UFO04435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15481813..15482855 | 1..1033 | 98 | == | Plus |
