UFO04444.5prime Sequence
1161 bp (1063 high quality bases) assembled on 2009-02-25
> UFO04444.5prime
CAGTCGACATGATGTACAACAACCGACCCACGGCTATCAGTCTAGAAGAG
GAGGTTCAATATATCTATAAGTACCCTTTGCTGCCGACTCCACTGATTGA
TTATGGATTTATCTACAATCTGGTTTGCAACAAGCCTCGGGATGTCAGTG
TGCCGTTGATCCTAGAAATTGAGACAGAGTTCAAGTCCAAAGACAGTGCT
CCTGAGAAGCCAAAGAAGGTGCCTAGGCTTTCATACCATTCCCGATCGAG
TTCAATGAGTGAAGATGAACCGGAACCGGAAGTGCAAGTTAAATACCAGT
GGAACTCGCCGCGGCTGATGATTCTCTGCGAAGATGGAGACATCAATTGC
GCTTTGCACTATCTCGTTGAGTCTCTTCACGATCCCTTCGCCTGCAATGC
GGTGGCCACTCTTTTCTTGCAGGAATCCATATTGGAGGAGTTCGTGGATC
GCATAAGGGATCGCCTGGAACCGTTGAGCACGGATATCTCCGGGCATCCG
GTTTATATAATGACACTGGAGAGAATAGGTCACTTACAGGCAAAGAGAAT
AGTTGGAAATCCCAAGACTGTTCCAGAAAATGCTAGTCCCATGCTGGTCT
ACGACCTTAGCCATCGTTACTTGGCTGATGGACCCACCGGGGTCATAACC
CTGCACACCTTTCGAACCATGAAGGAGGCCGTTGAGCTGCAGGCTAAGGA
ACCACTTAACTTTACCTCTGTGTGCATTTGGAACGAAAAACTGGCAGCCG
CCTACGAACTGGTGGCCCGATTAAGTCCGCTGATCTTCACGATTAATTGT
TACTACGTTAATCTGAACGAAATCACTCTGCCCTTCGTTTGCAACTTTAA
CTCCGCAAAGATTATCGACGGCTACCACTACGAGTCATTGACCTTTAAGG
AAAGCGCAAAGTGTTGTCCATCCAGTTGGCACCATCTGGGCAAAGTTGGC
CCGCGAGGCACTCGTCCAGTACGCAAGCTTTCTAGACCATTCGTTTGGCG
CCGCGGGCCCAGGTAGGTGTCATAATCATAATCATATTCATAATCATAAT
CACCACTAGCCTAGGAAATTCTGGTTCATGAACTATGGCTTGATCTACCA
ATAAAAACGCCCGGCGGTACCGAGCGTCTGACATTCGAATGGGTTTCTGA
GCTATACTGAT
UFO04444.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2336-RA | 1358 | CG2336-RA | 134..1099 | 9..972 | 4780 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6581073..6582012 | 35..972 | 4600 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:12:30 has no hits.
UFO04444.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:00 Download gff for
UFO04444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 64..1035 | 9..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:17 Download gff for
UFO04444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 134..1105 | 9..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:28 Download gff for
UFO04444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 134..1105 | 9..979 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:28 Download gff for
UFO04444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6581073..6582012 | 35..972 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:17 Download gff for
UFO04444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2406795..2407734 | 35..972 | 99 | == | Plus |
