UFO04445.5prime Sequence
1139 bp (1032 high quality bases) assembled on 2009-02-25
> UFO04445.5prime
CAGTCGACATGAACTTCATCTCGTTCAGCGTAATTAGCCGCTTTGACTTT
TTTTGGTTGGACGTGCTTAAGCAATTGGATCTGAAGTCTCGCATTAGCTT
TGCAGCCAGTTGCGATATGTTTGAGAACATCTATGTTAGGAGTTCTCCTC
TACGCCTGAGCCGCGTAGTTAATTTGGAGGAAATGATTGAGTTCTCATTG
CTTGAAACCAAACTATTTGTGGAACTTTCGGGTTCTGACATTGAGATTAT
ACGCGGAGGTCCACATACCCCAATGTTTTCACATTTCGAGGATTTCATAC
GCCTGATGTCGATCCGGCTAACGAAGGTGAATGAGATTGCTCTCGAGGGA
TTCCAACTCACGCAATACAAGTGGTTCAACGCTCCCGAAACCAGCTTCAG
CAACTTGACCTATGTTAGCTTGCGTCGTTGTCAGCTCAATGATGAGAACC
TTGTGGGCTGGGAGTTCTTGACTCATCTGGAGACATTGGATCTGAGATAC
AACGATCGATTGACTGGGAGCTGTTTGATGAGTCTTCCAACTTCGTTGTT
GTCCCTTTATATAACCGGCTGCCGGAATTTGTGCCCGAATCAACTAATAT
TCCTGAACCGTATACCACGACTACGCGAGCTGCGTGCCTCGGACCTGATG
CCCGGCGGGCACTGGCATATCTATCGTGACCTGGTGCTGGCTTGTCCCTT
GCTGGTGATGGTCGAGATATCAATTTGCTCCCTAAACCGGGATGAGTATA
GGCTGGGTGAGCTGCGCTATCTGCAGTCGTTGGTCATTAAAGCTCACTCC
ACAGACACAATTCGCTGTAAGTCAGCGACTGGATGCTGATTTCCCTATTG
GATGTGCCCTTTCTGCGAACCTGATGTTTCAGATGCACCGAGTGCTTTGT
TAGCGCAAATGCCCTGTCGATTATATCGAGATTTCGGCAGCTGCGTGTCT
GAAAATGCCGAATCAGCCATACCGGCCCATGACCTCTAGATTGAGATCTA
CTTTTTCTGAGACGCTGACCTCAGCATCACCCTATATCACTATGAGTTGT
CATCGACTGTCATAGAATTCCCACCTATGTTAATAGTCAAGATGTCCTCT
GGCTCCAATCCGGTTACCTTGAATGCCGATTGCAGTAGA
UFO04445.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15056-RA | 1424 | CG15056-RA | 105..1223 | 9..1101 | 4965 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18415608..18416567 | 25..979 | 4550 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:58:01 has no hits.
UFO04445.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:59 Download gff for
UFO04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15056-RA | 4..1094 | 7..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:35 Download gff for
UFO04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15056-RA | 4..1094 | 7..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:31:14 Download gff for
UFO04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15056-RA | 105..1192 | 9..1076 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:31:14 Download gff for
UFO04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18415519..18415538 | 9..28 | 100 | -> | Plus |
| X | 18415612..18416639 | 29..1042 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:35 Download gff for
UFO04445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18309552..18309571 | 9..28 | 100 | -> | Plus |
| arm_X | 18309645..18310672 | 29..1042 | 98 | == | Plus |
