UFO04454.5prime Sequence
1138 bp (1036 high quality bases) assembled on 2009-02-25
> UFO04454.5prime
CAGTCGACATGAAGCATCTCCTGACTGCACTCGTGGCCCTGCTGAGCATC
CTGCCGCGGGGCGAGCTCCTGGGATCAGGACCCCCCTGCCCGCGTCGCTA
TTTGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAAAAAGATGA
ACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGACCCTGGCA
GACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTCCTGAGTGG
CCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCTGTATCACG
AGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCTACTACAGC
AACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGACGACTGCCT
GGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGACAACTGCC
ACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGGGCACGGAT
AGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCATCACTTCCA
CCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGATGGCGATG
GCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGGAGCACCCG
GAGCCGGACTCGGAGGATGCAGTCGGGGCGCTCGACGTGCCCGATGACGA
TCAACCTGGTCAGAATGGCGTCTCGGTGACACCGGGAGCGGAAGAAACAA
ATACCGTTGGCGGAACTGGTGAGCCGGGCGCAACTGCCACCCCTGCCGCC
GGAGCTGAAGCTGTTTCTCCAGCAGCAGAAGGAGCCGCACCCGCCGGAGC
AGCTCCAGCTGCCGAAGTGCCGCCACTCCTGCCGCCGACGGAGCCACGCC
CGCACCCACTCCCGCGCCAGGAGCAGAGCACCCGCCGCCGCAGCAGCCGA
GACTCCGCACCGCCAGCAGCCGCAAGCTTTCTAAGACCATTCGTTTGGCG
CCGCGGGCCCAGGTAGGTGGTCATAATCATATTCATATTCTAATCCCAAC
TAGCCTAGGAATCCTGGTCATGACTAATGCCTGATCTCACCATAAAAACG
CCGGCGCACGAACGTTGACCATCCGAAATGGAATTACG
UFO04454.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-46Cb-RB | 1039 | CG1652-RB | 2..971 | 5..971 | 4700 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9815703..9816532 | 145..971 | 3940 | 99.2 | Plus |
| 2R | 25286936 | 2R | 9815511..9815652 | 5..146 | 695 | 99.3 | Plus |
Blast to na_te.dros performed 2014-11-28 19:25:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1048..1167 | 808..928 | 152 | 60.7 | Plus |
UFO04454.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:52 Download gff for
UFO04454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RA | 432..1410 | 1..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:45 Download gff for
UFO04454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RB | 2..977 | 5..978 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:05 Download gff for
UFO04454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RB | 2..977 | 5..978 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:05 Download gff for
UFO04454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9815507..9815652 | 1..146 | 97 | -> | Plus |
| 2R | 9815705..9816538 | 147..978 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:45 Download gff for
UFO04454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5703210..5704043 | 147..978 | 98 | | Plus |
| arm_2R | 5703012..5703157 | 1..146 | 97 | -> | Plus |
