UFO04456.5prime Sequence
1120 bp (1010 high quality bases) assembled on 2009-02-25
> UFO04456.5prime
CAGTCGACATGCTTCAGCGCAGCGGAAGATCCTCGAATGTTAGTACGGCC
CTGCGTCTGTTGGGCGCCAATGTGGAGTTGTTCGGTGTGCTCACCCGTAA
TCCCACCTATCGCATGATTCTGGATGATCTCGAGCAGCGGGGCATTGATA
TTAGCCATTGTACATTCACGGACGCAAGTCCTCCCTTTTCCACAATTGTC
CAAGATCGCTGGACGCGTCGTTGCACGGTGGTGTATTGCGACAAGTCATT
TCCATATGTTACGGCAGCGGATTTTCGCAAACTGGATCTCGATCAATACG
GCTGGGTGAATTTTGAGGCACGGAGTCCACGTGAAACTTGCGATATGATA
CGCCTAATCCTCGATCACAACAACGGGCGGGATGAACGGGATCGGATAGT
GGTATCGTTGCAGATTTTCAATTCCTTCGAACAGGTCGTGCATCTGATTG
CCATGTGCGACTATGTGTTCGTCACCAAGTATATAGCCGAGTCCAGAGGC
TGGAAGTCACCGCTGGAAGCCTGCGAGGGTGTCAATGCGCTACTGCGCAT
GCCAAGGAACATTAGAATTCGCAGACCCTGCATCATTGTGCCGTGGAGCA
GCCTGGGAGCAGGATGTATGACCACGGAAGGGGAGTACTTCGAAGTGCCA
GCACACAAGCCGAAAAAGATCATCGATCGGGTGGGCGATAGTGATTGCTT
CACGGCGGGCTTCATTTATGCCGCTTTTGTGCGGCAAAGGCGATTGGCCG
AAGCCGTGGACTTCGCCAATGCTGTGGCCAGCTATAAGTTGGGCTATGTG
GGTTTCGATTGCCTGGGTCATTTGCCAATCGATGCGGTTAAGCTGCCCGT
TAGAATGAGTGTGCAGTGAGTGTCCTCCGACGATGAGATACGGCGATCAG
TTGATAGCTGCAGAGCACCTGTTACGCTCGATTGAGTTCCTGCGGAAAGT
CTCATTGCACCCACTGAGAAGGAGTTCGATCGAGACTCGCAACTTTCTAG
CGCAAGCTTTCTAAACATCGTTGGCGCGGCCAGGTAAGGTGTCTAATCTA
ATCCTATCATAATCTATCCACTAGCTAGGAATCTGGCTGACTAGCTGGAA
TTCCCCAATAAAGTCGGATC
UFO04456.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-RA | 1395 | CG12289-RA | 305..1312 | 9..1001 | 4620 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11457159..11458166 | 1001..9 | 4315 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:43:33 has no hits.
UFO04456.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:49 Download gff for
UFO04456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RB | 130..1144 | 1..1001 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:32 Download gff for
UFO04456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 296..1312 | 1..1001 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:59 Download gff for
UFO04456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 296..1312 | 1..1001 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:59 Download gff for
UFO04456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11457159..11458171 | 1..1001 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:32 Download gff for
UFO04456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11450259..11451271 | 1..1001 | 97 | | Minus |
