UFO04458.5prime Sequence
1166 bp (1043 high quality bases) assembled on 2009-02-25
> UFO04458.5prime
CAGTCGACATGACGATGTGGATTGGCCAAAACACCCAGATTCGTTTGGTG
CCACTAAAGGATCCGCCAAAGACCATCCGATACAGTTTCCTGGCGACCAA
GTTCGGGCAGATGATGATGGGAGTGATAAACCCAATATCCGGCGATTCGA
AAGACCAAGTCGCAATTGGTGTGCTTCACTTCGTGATTAAGGACAATGTG
AGTACCTACAATGAAGTCCAGGAGCGGTGGCCAAAATCCGAACTCTGGAA
GGACGATGATGCGGTCAAGTTGGTGGCGGATAAACTGTTCGAAAGCGACA
AGGAAAACTCGCAGGCGATTCCCATTGCCATCTATGGAACCGACTTCCAG
CTGTCCGTATGGCGAGCTCTGGTGCATATGAAACGAGGGGAGACCTGCAC
TTACTCCCAACTGGCCGAGCGGATGGGTCGTCCAACGGCGGTCAGAGCAG
TGGCCAGTGCTGTGGCCAAAAATGAGCTTGCTATCCTCATTCCGTGCCAC
CGAGTTGTGTCCCAAAACGGAGCTTCGAAGTACCACTGGGGCGCAGCCCT
CAAGCAACTGCTTCTGGCCGATGAAAAGTCAAAGAACTATGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATATATTTGCCCATGGTGAAAACGGGGCGAGAGTTGTCCATATTGGC
CACGTTTAAATCAAAACTGGTGAAACTCACCCAGGATTGCCTGAGACGAA
AAACATATTTCTCAATAAACCCTTTAGGGAAATAGGCCAGGCTTCACGGT
AACGCCCAACTCTTGCGAATATAGTGTGTGTAGAACTTGCGATTCGTTCT
GTCAATCCACTCGAAG
UFO04458.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| agt-RA | 693 | CG1303-RA | 79..660 | 9..590 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6659441..6660022 | 590..9 | 2910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:59 has no hits.
UFO04458.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:58 Download gff for
UFO04458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 9..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:04 Download gff for
UFO04458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 9..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:11 Download gff for
UFO04458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 9..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:11 Download gff for
UFO04458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6659437..6660022 | 9..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:04 Download gff for
UFO04458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2485159..2485744 | 9..594 | 99 | | Minus |
