UFO04463.5prime Sequence
1170 bp (1053 high quality bases) assembled on 2009-02-25
> UFO04463.5prime
CAGTCGACATGGCTCTCGTCCAGAGTGATGAAAACGACTTCCATGCGCTT
CGAGAGGCGCAAAGGATGGTGGACTCGTGCCAGGACTTTGCGGACCACTT
GATCGTGGCCGAATTTCTACCCCATTGTCGCGGCGTGGCCTACATCAATA
TTCGCACCTTGGAGCAGGTCATCTATTGTGTGCAACTAAGTCGCGCTGGC
TATCGGATCGTGTCCTATGAGTTCGATGATGTGGCCGATGAGGTGGCCAA
TTGTGACACTGTCTATGAGTCCGCCCATCAATTGCTGGCAGGGATAAGTC
CGCTGTATGGCGAGAAATATGGCTTTGGACGAGAGCCACTGGGGAAGCGA
AAGGAGAAGCAGTCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACC
CTTTAGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATG
AAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACTAT
CCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATCCGATGAGC
ATTCATCAGCGGGCAAGAATGTGAATAGCCGATAACCTGTGGCTTATTTT
TTTACGTCTTAAAAGGCCGATATCCAGCGACGTTGGTTTAGTACTGAACA
TGACTGAATGCCTCAAATGG
UFO04463.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14505-RB | 956 | CG14505-RB | 26..382 | 9..365 | 1725 | 98.9 | Plus |
| CG14505-RC | 1033 | CG14505-RC | 26..382 | 9..365 | 1725 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18303596..18303952 | 365..9 | 1725 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:37:49 has no hits.
UFO04463.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:44 Download gff for
UFO04463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14505-RB | 20..382 | 1..365 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:25 Download gff for
UFO04463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14505-RC | 20..382 | 1..365 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:52 Download gff for
UFO04463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14505-RC | 20..382 | 1..365 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:52 Download gff for
UFO04463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18303596..18303956 | 1..365 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:25 Download gff for
UFO04463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14191101..14191461 | 1..365 | 97 | | Minus |
