UFO04467.5prime Sequence
1140 bp (1045 high quality bases) assembled on 2009-02-25
> UFO04467.5prime
CAGTCGACATGATTCAGGAACCGAACTGGAAAAAGGACTACGACCGTCTG
GTCCGCGAGCATTTGAATGATCAGAATCAGACGAAGTCGCTACAACGACA
AATACGGCATTTTCGCTCAAAGCGCGTACGACTCCAGAATGAAATCGAGG
CGGAGAGCAGGAGCATGGACGTTTGGGTAAAGATGATGGAGAACTTGCAC
CGCGGAGTGGAGCGCTTTCAGAAGCACCACCACCTGCTCACGCCCAAAAA
GCGCAAGCAGCTGCGCCGCATAATGCGAAAGCTGCCCTTGAGCAGTTTGG
ATGAGCAGGTGCGACTGATGGAGGTGTCGGAGCGGTTGGTGCCCAAGCCG
TGCAAGGAGACTCCTGAACCACCGAAGGGCAACGAACGCCAGTTCATCAA
GTACTCAGTTCCGCATCAGAAAAAGAACTGTGATCCTAATAATCAATCCC
CCGTGGACAAACGGCTGGCCAGGATATATGCCAATCTGAAGGCTCTGCTA
AAAATCCACGAGCAGACCTCGTCCGTCATCGCTGATATACATTCCCTGAT
CGCCACTATTAACTATTTGGAGCGGGGGCACTGCACCAAGATAAAGATCA
CTCCAGCGGAGGGCTCCAGGCCGTCAATAAAGGCTACCATCGAATTGGAT
CGGCTGCGCAAGACCAAGCACGGCAACCACTACACGCGGGAAATTATGGA
CGTACGTCCTCCGTACATCCTTGACCATGTGCCGCAATTGAAACCAAACA
TTTTCGACGCTCTGGGGAGAAAGGCGAAAAAATCAAAATCCAAGCACGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGAGTCAAGCGAGCTCGATATCAATAACGCCCCGCCTGCCACTCATC
GCAGATACTGGTGTAATTCATAAGCATTCTGCCGAATGGAAGCCATACCA
AACGGCATGATGACTGATCGCCACGCGGCCATCAGAACTG
UFO04467.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5478-RA | 1035 | CG5478-RA | 49..837 | 9..797 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15932898..15933686 | 797..9 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:03 has no hits.
UFO04467.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:40 Download gff for
UFO04467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 43..849 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:16 Download gff for
UFO04467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 43..849 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:35 Download gff for
UFO04467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 43..849 | 1..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:35 Download gff for
UFO04467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15932886..15933691 | 1..808 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:16 Download gff for
UFO04467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11758608..11759413 | 1..808 | 99 | | Minus |
