UFO04468.5prime Sequence
1152 bp (1039 high quality bases) assembled on 2009-02-25
> UFO04468.5prime
CAGTCGACATGCTTAAATATTTGGCTGGAATTTTCGTCAGTCCGCGCAAT
GACTACGCGAATGGTCGCTACAGGATTCCGCATCCGAAGAAGCTGGCCGC
CAGGCGAAAGTCGCCCCCGGTGAATATATCCACGAGGAGCGTCATCAATG
GCGGCAGGTCGGCAAACGGGAGGCTCAAGACGGAAAATAGAAACGCACGG
CGACGTCGAGAGGGCAATCCACATCTGACGCGACCACACAGCCGATCCTC
CCAGAAAACCATAGGGATCCGCCTGGATCCCATTAGCTACATCGTAAATG
TGCCCAATTCCACTTCATCGCCCGACGACGACGAGGAGGAGGTGCCTGTA
CCGCAATTGCCCAACGCAGTAAACAAACTGAAGGCTCGAACGTATCGGAA
GGAGAATTCCGATTGCCTTATTCCACCGCCAGTTAGTCGCGTCGCGAGTT
GGTCGGGTCCTTTGAATGCCAGTCCCTTCAACCAGCTGGATGAGCAGAAT
TCCATCTCTGACGATGCGGACGCAATGGGCTGGAAAGCGATTTGTTTGCC
AGATGATTTTTGGTCGGAGGATTCGGACTCGGAAAGCAAAAGCAAAATGA
GTAAAATCAATGTCTTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCA
GCGGCATCAGCACTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAC
GGGGGCGAAGAAGTTGTCAATATTGCCCGTTTAAATCAAACTGTGAAACT
CACCCAGGATGCTGAAACGAAAAAACAAATTCTCATAAACCCTTTAAGAA
TAGCCAAGTTAACGTAAACCGCCAATCTGCAATTATTGTGAGAACTGCCG
GA
UFO04468.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11756-RA | 746 | CG11756-RA | 86..694 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11348205..11348813 | 9..617 | 3045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:56 has no hits.
UFO04468.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:52:29 Download gff for
UFO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:03 Download gff for
UFO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:09 Download gff for
UFO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11756-RA | 86..697 | 9..621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:09 Download gff for
UFO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11348205..11348816 | 9..621 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:03 Download gff for
UFO04468.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11242238..11242849 | 9..621 | 99 | == | Plus |
