UFO04476.5prime Sequence
1141 bp (1046 high quality bases) assembled on 2009-02-25
> UFO04476.5prime
CAGTCGACATGACCGACCATTCAGCCCATCCAAACGAGGAGGAGGTGATC
GGGGACATCTACTTGTCCCTACTCTCGCGACATGCCCACAGATATCCGGA
GGATGGAAGCCACAAGTCGTGGATCCTTCCGCGCATGATGGTTCTGTTCG
CCAGTGGGGATATGGATCAGGTTATAGAGGCCATAGTCTCGGACATGATC
CATCCGATTGGAACTGGACTGGTGGCCAGTGTTCTGGTCGAGGAGTCCAT
ACGGGACGAGATGATTAAGAGAATACGAGCCAACTTGAAGCCGATGAGCG
AGCGCATCCAACACCATCCCAATTACCTGAAGACAGTGAAGCTCATCGAT
CGAATGAACTGCTCCACCATTCACATCGAGGAGTTCGAGGAGTCGGATAC
GAAGAAGCGTTATGGTCGCCGGATGAAGGGATCCCCTTTGATAGTCTTGG
ATTTCCCCCAATTCTATTTCGGTGGCAAGCCCACGGCCATAATGACTATG
AGCACCTTTCGCAATATGAATGAAGTGGTTAAGTTGCATTCGCGCGAAGG
TCTGAATTTCGACTGTATTACCGTGTGGTCAGCCAAGTTGGCCCAGTGCT
TCGACCTGCTCACCAGAGTGCCCACGGTGGACCAGTGGACCTTCAACTGC
ACCAAGGAATCCATCAAGGTTCCAAAACTGCCAGCTCAACCGACCACCAC
AGTTATAATCGTTAAGAACATTCACTATGAAGTCCACGTCATTGGCGGAA
AGATCAAAACTATAGCGTTTCCAATCGTAGATACTTCTGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGTCATTACTGGATTTATCAACAGGAGTCC
AGCGAGCTCGATATCAAATTACGCCCCCGCCTGCCACTCATCGCAGTACT
TTTTGTAATTCATTAAGCAATTCTGCCGACATGAGCCATCTCAAACGGCA
TGTATGACTGATCGCCCAGCGCACCCAACCTTTGTTCCTTT
UFO04476.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13539-RB | 1099 | CG13539-RB | 278..1057 | 9..788 | 3855 | 99.6 | Plus |
CG13539-RA | 881 | CG13539-RA | 60..839 | 9..788 | 3855 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23184467..23185246 | 9..788 | 3855 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:13:02 has no hits.
UFO04476.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:26 Download gff for
UFO04476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13539-RA | 60..845 | 9..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:40 Download gff for
UFO04476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13539-RA | 60..845 | 9..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:53:43 Download gff for
UFO04476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13539-RA | 60..845 | 9..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:53:43 Download gff for
UFO04476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23184467..23185252 | 9..795 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:40 Download gff for
UFO04476.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19071990..19072775 | 9..795 | 99 | == | Plus |