UFO04479.5prime Sequence
1132 bp (1025 high quality bases) assembled on 2009-02-25
> UFO04479.5prime
CAGTCGACATGATGAAACTTTTGGTTTGCGTCCTGCTGGTAGGATCCTGT
ACGGCTGTTCCCCTCCTTACCGATGTGGAACCCTATATTACGAATGGAGA
ACCGGCGGAGGTGGGTCAGTTTCCCTACCAGGCCGGTCTGAACGTCTCCT
TCGGGAACTGGAGCACTTGGTGCGGCGGCACCTTGATCTCACACTACTGG
ATAATCACAGCAGCACACTGCATGGATGGGGCGGAGTCCGTAACGGTCTA
TTTGGGGGCCATAAACATCGGTGATGAGTCCGAGGAGGGTCAGGAAAGGA
TCATGGTGGAGAAGTCGGGTATTATAGTGCACTCGAACTATATGGCCAGC
ACGGTGGTCAATGACATCTCGCTTATTCGATTGCCCGCCTTTGTGGGTTT
CACTGATCGCATCCGGGCCGCCAGTTTGCCCCGTCGCTTGAATGGCCAGT
TTCCCACGTACGAGTCCATCCGGGCCTTCGCCTCCGGCTGGGGGCGGGAA
AGCGATGCCTCCGACTCGGTTTCCCCCGTGCTGAGATACGTGGAGATGCC
CATTATGCCTCACTCCCTGTGCCGGATGTACTGGAGTGGAGCTGTGTCGG
AGAAGATGATCTGCATGAGCACCACCAGCGGCAAGTCCACCTGCCATGGT
GACTCTGGCGGTCCGCTGGTCTACAAGCAGGGCAACTCCAGCTACCTGAT
CGGATCCACCTCTTTTGGAACCTCTATGGGATGTCAAGTGGGATTCCCGG
CCGTGTTCACCCGCATCAGCAGCTACTTGGACTGGATCCTTAACCATATC
ATCGCCCATAATAAAGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGGAGCGTTCTGAACAATTCAGATGGGAGTT
CTGAGGTCATTACTGGATTTATTCAACAGGAGTCCAGCGGGCTCGATATC
AATTACGCCCCGGCCTGCCATCCTTCCGAGTATCTGGTGTGGAATTCATT
AAGCATCGGCCGAACTGGAGGCATACAAAACG
UFO04479.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7542-RB | 1155 | CG7542-RB | 12..821 | 9..818 | 4020 | 99.8 | Plus |
| CG7542-RA | 833 | CG7542-RA | 12..821 | 9..818 | 4020 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17549837..17550646 | 9..818 | 4020 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:29 has no hits.
UFO04479.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:23 Download gff for
UFO04479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7542-RA | 12..833 | 9..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:55 Download gff for
UFO04479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7542-RA | 12..833 | 9..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:17 Download gff for
UFO04479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7542-RA | 12..833 | 9..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:17 Download gff for
UFO04479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17549837..17550652 | 9..825 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:55 Download gff for
UFO04479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17542937..17543752 | 9..825 | 99 | == | Plus |
