UFO04492.5prime Sequence
1133 bp (1020 high quality bases) assembled on 2009-02-25
> UFO04492.5prime
CAGTCGACATGCCCTATCTATATGGAATAGCGGACACCAAGTTCCTCCAC
CAGAAGGTGAAAAAGAAGACAAAGATCCGTTCGGATATGGCACCCACCAA
GTTCCAACGGAATGAGTTCCTAAAGGGCTGTCCCAAGTACGATGGGGACG
ATATACCCATACAGTTCAGGACGACACCCGATTCTCTCGTGGAACTGAGC
ATCATTGTGGTGGACAAGCTGCCATTGCCTTCGATATTCGAATGGGATGA
CATGGACATCAGGCGCTGGATCAATGGCTACGGATATCCACAGTACATGA
ACACTTTCCGGGTGAACATGATCACGGGTCGCAAGCTACTGCTCCTGGAC
GCCTCCGCTCTGTGTGCGATGAACATCAAGAATTTCGATCACATCCGTCA
CATATCCTATGGCATCCGTATGCTCTTCCACTTCGAGCTGACGAAGTTCT
CATCCAGCATCTCGCTGCCGGACGAGAAGCCCAATGAGCTGTACCTGCTG
TTCCACACGCAGACCGGAGTAAACTATGACGAGGTGCGCAGGAGTGATCT
CTACCGACGGATGCAGATGCTACGGGAGCGGGCCCGCAACCTGGACCACT
GGGATCTACTGTACCTGTGGCTGCGCCACGAGCAGGAGCGCAAGTACAAG
GAGCTCATCGGCATGGTACCGCGCTTCACGATGTACAAGTGCGAGGAGGC
GGCAAAGCCGCCGGAGGAACCCGAGGACATGGAACCCGAGGAACTCATGT
GCATGACCTGCATTCCGCCGTGCGACTGCGACTGGACCGCACGGGATCTC
CGGCTGCCGTGGCGATTGGAGTGCCTGCCGCCCATGCTGGAAACCACCAT
GAGCAAGTGGAACGCCTTGCAGCGCAGTGCTCCACCTGCATCCCGCCGTG
CGAGTGCCGCTGGCCACCGCGATTCTATCTCACGGGCACCGTCATTCGCT
GCTGCAGCACGGTTCCCGGAAAAGTTCTGCCTCATCTTCGACGACGTACA
GGCCTCGCCGCGACCCAGTCTTCGTGGAAGCGCTGGACGCGATTCTCCAT
TGCAAGCTTTCTAGACATTCGTTGGCGCCGGCCAGTAAAGGCCTAATCAA
TCTATCTAATCTAATCCACATAGCCTAGAATCT
UFO04492.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15625-RA | 1222 | CG15625-RA | 83..1129 | 9..1051 | 5015 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4890428..4891184 | 299..1051 | 3385 | 98.6 | Plus |
| 2L | 23513712 | 2L | 4890077..4890367 | 9..299 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:07:51 has no hits.
UFO04492.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:16 Download gff for
UFO04492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:49 Download gff for
UFO04492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 9..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:45 Download gff for
UFO04492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 9..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:45 Download gff for
UFO04492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4890077..4890367 | 9..299 | 100 | -> | Plus |
| 2L | 4890429..4891184 | 300..1051 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:49 Download gff for
UFO04492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4890077..4890367 | 9..299 | 100 | -> | Plus |
| arm_2L | 4890429..4891184 | 300..1051 | 98 | == | Plus |
