UFO04496.5prime Sequence
1105 bp (1016 high quality bases) assembled on 2009-02-25
> UFO04496.5prime
CAGTCGACATGAACAAAAGCCAAAAGTCCCTGGCGGACGACATGGCCTCG
ACGCCTTTCGGCAAGGAGGTGCTGATTGGCAACTGGGCGGAGCGCCGCTA
CGCAGTCGAGGAGCAGAGCAATGCCATCCTGCCAGGACTCCGTGTGAGTG
GTTGCGAGCTCCATAGGTCGCTCTGCCACGACACCTACACTACTGCACCC
TTCGTTGGCGCCGAGGCAGTACCCTTGTTTGTGGATCATCGCAAATTGGC
TTACAAGAACTTTATAAGGAATAGGCGATCTAGCTTGAACCTGGTGGACG
ATGAGCTACTCAAGAGGAACTTCACTACCACCAATACCCTGGAGTTCCAG
GAAATTCCTCGACTGCGTCTTATACACGCGAGTGGCGAAAAGGACAAAAA
CGGTCCTCCGAAGCAGCCGCTGGACGTGGACAGACTGCAAGCCTTCGGAA
ATCTTACGAAGACACACAATTACCTCTTTCGGTTCAAGTGCGAGAAAATG
CTGGACGAGATCAGTAACATGCAGACCACCTACTCCGCGAGCTTTAACCG
ACCGTGGGAAAAAAAGCCAATCTTTGAATTTGGTCCAGACTACGACGGAG
TCGTTAAGTTTGACTTGACGTGCGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGAAGCCATCACAAACGGCATGATGAACTGA
ATCGCAGCGGCATCAGCACCTTGTCGCTTGCGTATAATATTGCCCATGTG
AAAAACGGGGCGAAGAAGTTGTCAATATGCCACGTTTAATCAAACTGTGA
ACTCACCCAGGATGCTGGAAACCGAAAAACACTATTTCTCCATTAAACCT
TTAAG
UFO04496.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14448-RA | 809 | CG14448-RA | 83..697 | 9..623 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22788521..22789135 | 9..623 | 3075 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:37 has no hits.
UFO04496.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:21 Download gff for
UFO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 2..629 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:41 Download gff for
UFO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 2..629 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:51 Download gff for
UFO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14448-RA | 80..701 | 2..629 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:51 Download gff for
UFO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22788518..22789139 | 2..629 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:41 Download gff for
UFO04496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22781618..22782239 | 2..629 | 98 | == | Plus |
