UFO04504.5prime Sequence
1110 bp (1002 high quality bases) assembled on 2009-06-09
> UFO04504.5prime
CAGTCGACATGGATAGCGAGCTGAACGGATCGGAACTTGGCACCAAGGAA
TTTTGGGAGTCCAGCTACAACCGGGAGATACGAAACTACAAGAGCCACGG
CGACGTGGGCGAGATCTGGTTTGACGAAAGTGCCCAATGGCGAACGATCG
ACTGGCTGCTTAACGAGGAGAAGATCGACAAGGAGGCGAGTCGAGTGCTG
GACCTGGGCTGCGGCAATGGCATGTTCCTAGTGGGCCTGGCAAATGAAGG
CTTCACCGGAGACCTGACCGGCGTGGACTACTCTCCCAAAGCCGTCGAGC
TGGCGCAAAACATTGCGGAGGATAACAAGCTGAGCATCACATACAAGGTG
GCGGACTTAACCCAGCCGCAGAACGAGCTGGGCCAATTTGACGTGGTGCA
CGACAAGGGAACCTACGATGCAGTCAGTCTTTGTCCGGATAATGCCAAGG
AGAAACGTGCTCTCTACCTGGACACGGTGGAGAAGTTGCTGCGAACTGCT
GACAGCCTGTTTGTAATCACGTCGTGCAATTGGACCGAGGACGAGCTGGT
GGATAGCTTTGCCGAGAAGTTTGTCAAGTACTATACCATTCCCACGCCGA
CCTTTAAGTTTGGCGGCAAGGTGGGCAATGTGGTAACCTCAATTGTTTTC
AAAAGGAAAAAGGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGATTCTGAG
GTCATACTGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCAAATGCG
CCCCGCCCTGCCACTCATCGAATATGTTGTAATCATTAACATTCTGCCGA
CATGAAGCCATCACAACGCATGATGAACCTGATCGCCAGGGTATAGTACC
TTGTTGCCTGGGTTATAGTTTGCATGGTGAAACGGGGCGAAGAGTTGTCA
TATGGCCGGTTATCAACCGGGAAACTCCCGGGATCGCTGAACAAACCATC
TCCATACACC
UFO04504.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 878 | CG9643-RB | 84..740 | 9..665 | 3270 | 99.8 | Plus |
| CG9643-RA | 763 | CG9643-RA | 84..740 | 9..665 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2978549..2979205 | 665..9 | 3270 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:58 has no hits.
UFO04504.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:06 Download gff for
UFO04504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 206..865 | 9..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:36 Download gff for
UFO04504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 9..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:35 Download gff for
UFO04504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 9..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:35 Download gff for
UFO04504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2978545..2979205 | 9..669 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:36 Download gff for
UFO04504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2978545..2979205 | 9..669 | 99 | | Minus |
