UFO04509.5prime Sequence
320 bp (267 high quality bases) assembled on 2009-06-09
> UFO04509.5prime
CAGTCGACATGGTGTCGAAAGTTTCTCGCGATACGATTTACGTTGCAGTC
AAAAATATCCTGCTGAACTCGCAGGCCAAAGGACCAGACTGCCTGGAGAC
GGTGGAGCTGCAGATTGGGCTGAGGGATTATGATCCTGACAAATGCAAGC
GGTTCCATGGAAGTGTACTATTGCATCACCTGGCGGTTCCACAACTAAAG
GTCTGCGTCTTCGGGGGATCAGGAGCACTGTTATAAGGCCAAAGCCATAG
GAGTTTGATTGCCTAGATGTGGGAGGCTTTGAAAAAAGCCTGAACAAAGA
TCCCCAAGTTTGAACAAAGA
UFO04509.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL10Aa-RA | 784 | CG3843-RA | 58..353 | 9..310 | 1360 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15037423..15037713 | 9..304 | 1250 | 98 | Plus |
Blast to na_te.dros performed 2014-11-28 19:34:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 3745..3776 | 79..48 | 106 | 81.2 | Minus |
UFO04509.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:08 Download gff for
UFO04509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL10Aa-RA | 58..360 | 9..319 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:53 Download gff for
UFO04509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL10Aa-RA | 58..360 | 9..319 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:36 Download gff for
UFO04509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL10Aa-RA | 58..360 | 9..319 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:36 Download gff for
UFO04509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15037423..15037725 | 9..319 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:53 Download gff for
UFO04509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10863145..10863447 | 9..319 | 97 | | Plus |
