UFO04517.5prime Sequence
619 bp (619 high quality bases) assembled on 2009-06-09
> UFO04517.5prime
CAGTCGACATGAAGTCGATTCAGGCCCGGTTGAACCACCGATTCCGAAAA
ACTTTGGCGATGGACAAGCCGTCTAGCAGCAATAGCAATCGAATGAGCAG
GAGCACTTCGAACTGCAGGAGCCCGGCCATAATACGTAGTCCGCTGAACT
CTGAGGAATTTCAGGACTCGGCAACGGCTGCCGCCACACAACAACGGCTT
TTCTGGAGCGGCCAGCGGGCCTCGACGGCGGGCAGGGATGATAAAACCAA
GCCTGATTCGACTGCCGCCGGAAAAAAGAAGCCACCTACGACGACAAGGC
AGTCAAATTTTACCCAGACCGAACGAAGACGGACACATCGCAAGCTGAGT
CCGCGGAGCACGCGTTGCAATTCGGTGGCAGTTACGGCGCTGGTCAGCAG
AGAAAATATACCGCAAACATCCGGGTACAGAAGGCCAGAGGACCTAACCG
CCCGGTGCAGTGCGTCGCACGAGGGGCGCAAGCTTCTGCAGGAGCGGCTG
ATGGTGCGGGTGGACGCACTGTTCAACATGCTCTTCTCTGCCTCGGCGTT
CCTGCAGAGCTTCCATGAGCGGCGCAAGTCCACCGATCCTGAATATGGGC
GTCTGGTCGCGAAATGCCG
UFO04517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30284-RB | 1083 | CG30284-RB | 64..673 | 9..619 | 2970 | 99.2 | Plus |
CG30284-RA | 1180 | CG30284-RA | 77..492 | 9..424 | 2050 | 99.5 | Plus |
CG30284-RA | 1180 | CG30284-RA | 575..770 | 423..619 | 930 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21651508..21651923 | 424..9 | 2050 | 99.5 | Minus |
2R | 25286936 | 2R | 21651230..21651425 | 619..423 | 905 | 98.5 | Minus |
Blast to na_te.dros performed 2014-11-28 19:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osvaldo | 1543 | Osvaldo OSV 1543bp | 8..58 | 128..177 | 108 | 70.6 | Plus |
UFO04517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:13 Download gff for
UFO04517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30284-RB | 64..673 | 9..619 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:53 Download gff for
UFO04517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30284-RB | 64..673 | 9..619 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:38 Download gff for
UFO04517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30284-RB | 64..673 | 9..619 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:38 Download gff for
UFO04517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21651230..21651424 | 424..619 | 98 | <- | Minus |
2R | 21651509..21651923 | 9..423 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:53 Download gff for
UFO04517.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17539014..17539428 | 9..423 | 99 | | Minus |
arm_2R | 17538735..17538929 | 424..619 | 98 | <- | Minus |