UFO04520.5prime Sequence
1093 bp (963 high quality bases) assembled on 2009-06-09
> UFO04520.5prime
CAGTCGACATGAGTATGATACAAGAAGAGACCAAGGCCAGCGTAATCAGC
GTGGTAAAGCCGCCACCGAGTTGGGTGGAATGGTGCGAGCGGAATGCCAA
GCCGATCGAACGTCGGCTCATCAAGGAGAGGCGCTATCTAACCAGATGGC
AAATTCCCGGACCGATGAAAAAGGCACAGTGGAGGGAGTTCTACGAGTGG
GCAGCCTCCAGAGCCATGCCAAAGGAACTACCGGTGCCGGTCAAACAGCC
CATACCCTGTGTTGACAAGTTCTTGCCATGCGCCAGAAAACCACGCGCAA
TCGATCCGGACGAATTTCAGGAGAAGGTCGCCAAGTTGGCCACGCCACTG
GAACGGAAAATGACGCCGAAGCATCAGTACATCTATCCGGTCCAACCGTA
CTCCCCAATAATTGTCTGGGGTCAGCCGCCACTCCATGACAAAGGACGAC
CCTTTAAGCCCCCTCAAAAACCCTGCTGCTTCTTCAATGCCGACATCGAG
GACAAATGGTGGGCCGAACTGCGCTTTCCCATCCGCAAGGCTGCTCTCAA
AGCCAGGATAACTCCGCGCATCCTTAGCCTGTCGAAACCAAAGATCACGC
CTCAGTTCCCACCGCATTGCTATCATCCGGAGCATATATATGACGTGCTT
AATGTCAAACCGCCACGGAGGAAGAAGTTTACTCCCCAGGGATGGCGTCT
CCACCAGATCAGATTGCTATATCTTTCGAAGCCTGTGTCCCGGCCCGAAT
ACGAGTATTTTTATATGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGTGATCCTGGTCATGACTAGTGCTTGGATTCTCCCCAATAAA
AAACGCCCGGCGGCCACCGAGCGTTCTTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATTCTATTGCAGGAGTCCAAGGCGAGCTCGGTATCA
AATTACGCCCCGGCCTTGCCCTCATCGAGTACTGTGGTTATCACTTATGC
ATTTCGCCGAACTGCGAGGCATCCTAACGCATGGATGAACCTG
UFO04520.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3581-RA | 1033 | CG3581-RA | 131..890 | 8..767 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19373900..19374659 | 767..8 | 3800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:30:19 has no hits.
UFO04520.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:17 Download gff for
UFO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 83..853 | 1..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:14 Download gff for
UFO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 123..893 | 1..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:06 Download gff for
UFO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 123..893 | 1..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:06 Download gff for
UFO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19373897..19374662 | 1..771 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:14 Download gff for
UFO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15199619..15200384 | 1..771 | 99 | | Minus |
