UFO04527.5prime Sequence
1064 bp (995 high quality bases) assembled on 2009-06-09
> UFO04527.5prime
CAGTCGACATGTCCTCGCCCACAGATTTCGACCGTTCCATGCTGGTGGAG
TACAGTGCCGCATTTATGTACTACATTGAGAAGCACAAGCTGATGGAGGT
GATGAGTCGTCTCCTGGCCGAGATTTCCGTGGCGGATGGAGTGACAGATG
TGCGAAGATGGATGGGCGAGAACATAACCAGGATCGGCGTAGAGATATAC
ACCAAATCGATGGACGCCTTTCATCGGGGAGTAAGGGGTGATTTCTACCA
GCTGCCCAGGAGCTTCTACCACCGAATAGTGCTGCACGGCAAGCCAGGAT
CTGGGCGAAGGTCCTTGGCATATGTGCTAGCCCAGCGCTGGAATCTGCTA
ATATTGGATGCCGATGTGCTGGCCTATCATAGCATCAACAAACAGGACCA
GGATGAGCCGTCCAGATTGCTGCAGGAAGCCATTGAAAAGGATTGTGTCT
ACAAACGTTCGCAGGCAGTGGGCAATCTCATCGAGAACAGACTCCTCCAG
GAGGACGCCCTTCACAGGGGTTGGATTCTGATCAATTACCCGAACAATAA
GTGCGAGGCTGAGGAACTCTTCGAGGGCTTCACTGTGCCACCGAATCGAT
TCGTATTCCTACAAATCGACGAGCGTCTGGCTCGCATGAGAATCCTGCTC
AATAGCTACTCGCCAGGACCTCAAGCTCACGTCAGTTTTGTGGACCGCCA
GATGGCCCAGTTCCGGAAAAGTGAACCTGCTCTAAGCTCCTACCTCAGCC
AGCGGAGAGAAGTGGTCTATGTGGATGCGTCACCTTGTTTCGAGCAGGTC
AAGTGCGGGATCATCTCGGAGCTCACCAAAACTCCCTATGTGCTGGGTAA
AAAATACGGCGAGGCAAATGCCAAAATCGCAAGCTTTCTACACCATTCGG
TTGGGGCGCCGGCCCAGGTAAGTGGTCATAATCATAATCATACTCATAAT
CATAATCACAACTACCTAAGAGATCTGGCTATGACTAGTGGCTTGAATCT
CACCAAAAATGAGCCCGGGGGCACCCGAGCGTTTTGAACATATCAGAGGG
AGTCTGAAGGCTTT
UFO04527.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15543-RB | 1595 | CG15543-RB | 61..934 | 5..878 | 4355 | 99.9 | Plus |
| CG15543-RA | 1036 | CG15543-RA | 61..934 | 5..878 | 4355 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30742940..30743813 | 5..878 | 4355 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:30:29 has no hits.
UFO04527.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:24 Download gff for
UFO04527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 37..920 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:21 Download gff for
UFO04527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 58..941 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:12 Download gff for
UFO04527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 58..941 | 1..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:12 Download gff for
UFO04527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30742937..30743820 | 1..887 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:21 Download gff for
UFO04527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26568659..26569542 | 1..887 | 99 | | Plus |
