UFO04529.5prime Sequence
982 bp (948 high quality bases) assembled on 2009-06-09
> UFO04529.5prime
CAGTCGACATGGAGGAGTATTCGCGGGAACCGTGTCCCCATCGCATCGTC
GACGACTGCGGAGGAGCCTTTATCATGGGCTGCGTTGGAGGCGGGCTCTT
TCAGGGACTGAAGGGATTCCGGAACGCACCACAGGGACTAGGACGCAGGG
TCGCCGGCAGTGTGGCTGCCATCAAGACCAAATCTCCGGTGATAGGTGGA
AGTTTCGCCGCCTGGGGTGCAGTGTTCAGCATTGTGGACTGCAGTCTGGT
CCACTTTCGCCAAAAGGAGGATCCCTGGAACTCGATAGTGAGCGGAGCAG
TTACTGGTGGAATTCTGGCCTCACGCAATGGAGCGGCGGCCATGGCTGGA
AGTGCAATTATCGGTGGCGTACTGCTCTCAATGATCGAGGGCTTAGGCAT
ATTTTTTACACGTTTCGCGGCGGAACAGTTCCGAAATCGTGAACCGCATA
TCATGCCTGATGCCAATGAAGGATACGGTGACTTCAACTCTTCCGGATTT
GGATTTCCGGGTGCTCAGCAGGCCACTGCAACTAGCGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
CTGTTGTATTCATTAGCATTCTGCCGACATGGAGCCATCACAACGGCATG
ATGACCTGATCGCCAGCGGTGTCAGCCACCTTGTCGCCTTGCGTATATAT
TTGCCCATGGTGAACCGGGGCGAACAAGTTGTCCACTTGGCCCCGTTTAA
CCCAACTGGTGAAACTCTCCCTGGGATTGGGT
UFO04529.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tim17b2-RC | 817 | CG15257-RC | 109..636 | 9..536 | 2610 | 99.6 | Plus |
| Tim17b2-RA | 761 | CG15257-RA | 109..636 | 9..536 | 2610 | 99.6 | Plus |
| CG1724-RA | 843 | CG1724-RA | 125..521 | 4..400 | 665 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15484837..15485364 | 9..536 | 2610 | 99.6 | Plus |
| X | 23542271 | X | 21202821..21203217 | 400..4 | 650 | 77.6 | Minus |
| 3R | 32079331 | 3R | 12364287..12364372 | 310..225 | 190 | 81.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:52 has no hits.
UFO04529.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:26 Download gff for
UFO04529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b2-RA | 61..603 | 2..544 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:19 Download gff for
UFO04529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b2-RA | 100..642 | 2..544 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:54 Download gff for
UFO04529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b2-RA | 100..642 | 2..544 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:54 Download gff for
UFO04529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15484828..15485370 | 2..544 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:19 Download gff for
UFO04529.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15484828..15485370 | 2..544 | 98 | == | Plus |
