UFO04535.5prime Sequence
1070 bp (945 high quality bases) assembled on 2009-06-09
> UFO04535.5prime
CAGTCGACATGGTTTCCCGATTCGACCAACAAAAGACCAAGCACCAGCTC
TTCCACGTGTCCCTCAGCCTCGCCACCATCCTGATCTGCATGGCGTACAT
GCAGTATCGCCGGAATTGGGCACATCTCGGCAGCTTCTGGGATTCTCTTG
TCGTCCCTATTGTTTTCCTCGGAGAGCTGCTAAAAGTTGTTTTGGCTCGC
TTCTACGGGAAGGTTGAGGATGGCGTCCTAACCGCCAAACAGCGCCAGAA
AAAGAACTCGTACTTTACGCCGCGGGAGCTCCTCGGAGGATTCACCCTGC
AGTTCCTGTGTACACTCCTCTACGCCTTTATCTGCATAATTTTGGGAGCC
CCGGTGCTGGGCAACTATGAGCAGACCTTCGTCTTGGCCTTACTGATGAC
CTTGTTGACGGTGTCACCCACGGTTTTCCTCCTCGGTGGCGGAGGAGCAC
TACAAGTGTGCTTCTGCGAGAAACCGGACTTTGTGACCAAGTGCGAGGAC
ACGGCTCTGAATCTGTTCAAGTACAATGCACTGGGCGGTATTCTGGGAGC
TTGGGCCGGGAGCGTGGTCGCTCCACTAGACTGGGGACGTGACTGGCAGG
CTTATCCCATTCCCAACGTGATCGGAGCACTGCTGGGAAGCGCTCTGGGC
AATATATACGCTTGTACGCATGTCCTCTACGCCACAGCTCGAGTTTACAT
GACCAAGAAACGCACTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGATTCTCACCAATAAAA
AACGCCCGGCGGCAACGAGCGTTCTGAACAAATCAAGATGGAGTTCTGAG
TCATTACTGGATCTATCACAGGAGTCCAAGCGAACTCGATACAATTTACG
TCCGGCTTGCATTCATCGAGACTTGTTGTATTCATAAGCATCTGTCCGAC
TGGGAGCATCACAACGCATGATGAACTGGATGCCACGCGATCGCACTTGT
CTCCTTTGCTTAAAATTGGC
UFO04535.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9376-RA | 1035 | CG9376-RA | 96..804 | 8..716 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19612550..19613258 | 8..716 | 3545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:34:27 has no hits.
UFO04535.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:19 Download gff for
UFO04535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9376-RA | 4..727 | 1..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:02 Download gff for
UFO04535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9376-RA | 88..811 | 1..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:44 Download gff for
UFO04535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9376-RA | 88..811 | 1..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:44 Download gff for
UFO04535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19612542..19613265 | 1..723 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:02 Download gff for
UFO04535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19605642..19606365 | 1..723 | 99 | == | Plus |
