Clone UFO04537 Report

Search the DGRC for UFO04537

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:45
Well:37
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG12229-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04537.5prime Sequence

576 bp (576 high quality bases) assembled on 2009-06-09

> UFO04537.5prime
CAGTCGACATGCCGATCAACCAGAAAGAAGTAACGCCGCAACTAGACAGT
CAGACAGGTGAGGATCAGGGGGAGGAGGAGGAGCAGCCGGAAGACGAGAA
TCGTCTGGAGAAGTTTACGGTGCGTCTTAATGGACAACATGACCTGGAGC
AGCGTTTAAAGGATTTCAAAGCGGCATGCGAGGCTCACGAGAAGCACGCC
AGACGGCGAAAACGGAAGAGATACTATCATTTGGGTCTTGTGGCCAAGCT
GGTGACGGAAACCACTCACGACGAGCTGCGACGTATGCTGGAAAATGGAA
CCTACACCTTTCACGTGGATACGGTGGGCAACAAGCCCGATGAACTGAAA
GCCATTTTGGACACCATGAACATTGCGATATCGGCGCATTCTGCAGAGAG
GGAACTACGTCTGACAACTGGCTTGGCTCTGGAGATTAACGGCGAGTGCT
GTCGCGTTGGGAGACTGAGGAACAACTGCACCGTGATGCTGGCACGAGGT
GGGGTGGTCACACTCACCACGGATGAGTCCTACCGCTACAAATGCTTTAA
AGAAATAGTGAACGTAATCAATCTGC

UFO04537.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12229-RA 1960 CG12229-RA 185..752 9..576 2810 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17435680..17436247 576..9 2810 99.6 Minus
Blast to na_te.dros performed on 2014-11-28 19:34:33 has no hits.

UFO04537.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:34 Download gff for UFO04537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..752 1..576 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:08 Download gff for UFO04537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..752 1..576 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:46 Download gff for UFO04537.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12229-RA 181..752 1..576 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:46 Download gff for UFO04537.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17435680..17436251 1..576 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:08 Download gff for UFO04537.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17428780..17429351 1..576 98   Minus