UFO04551.5prime Sequence
944 bp (931 high quality bases) assembled on 2009-06-09
> UFO04551.5prime
CAGTCGACATGGCGGAGTACGGTCGGGAGCCTTGTCCCTTTCGCATTGTC
GAGGATTGTGGTGGAGCCTTCGCAATGGGCGCCTTGGGCGGAGGAGCCTT
CCAGGCGATCAAGGGCTTTCGAAACGCCCCCTCCGGCCTGGGATACCGAT
TGAGCGGAGGATTGGCGGCGGTACGGGCTCGATCCGGCCTGGTGGGTGGT
AACTTTGCGGTGTGGGGCGCTACCTTCAGCGCCATCGACTGCTCACTGGT
TTACTTCCGGAAGAAGGAGGACCCGTGGAACGCCATAATTAGTGGAGCAA
CCACCGGGGGCATTCTTGCTGCTAGAACTGGACTAACCTCCATGCTCAGT
AGTGCCTTGGTGGGCGGGGCTCTATTGGCCCTAATAGAGGGCGTGGGCAT
TGTGGTGTCCCATTATTCGGCGGATTCCTACCGCCAGGTGTCGCCCGTGG
AGCGGCAGCAACGGTATAAGCAGGAGCTTTTACGGCAGCAAAAGGGCGTT
TCTCCACTCGCAGCGACTTATGGAGAGATTGACTCTTCGGCATTGGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTGTAATTTCATAAAGCATCTGCCGACATGGAAAGCATC
ACAAACGGCATGATGACCTGAATCGCGTAGCTGCATCACACTTGTCGCTT
CGCGATAATACTTGTCCATGGTGAAACGGGGCCAAAAATTGTCC
UFO04551.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tim17b1-RA | 785 | CG1158-RA | 45..584 | 6..545 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5300189..5300514 | 6..331 | 1630 | 100 | Plus |
| 3R | 32079331 | 3R | 5300704..5300901 | 330..527 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:28:07 has no hits.
UFO04551.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:55 Download gff for
UFO04551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 40..584 | 1..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:42 Download gff for
UFO04551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 40..584 | 1..545 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:44 Download gff for
UFO04551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 40..584 | 1..545 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:44 Download gff for
UFO04551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5300184..5300513 | 1..330 | 99 | -> | Plus |
| 3R | 5300705..5300901 | 331..527 | 100 | -> | Plus |
| 3R | 5300968..5300984 | 528..544 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:42 Download gff for
UFO04551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1125906..1126235 | 1..330 | 99 | -> | Plus |
| arm_3R | 1126427..1126623 | 331..527 | 100 | -> | Plus |
| arm_3R | 1126690..1126706 | 528..544 | 100 | -> | Plus |
