UFO04553.5prime Sequence
1035 bp (938 high quality bases) assembled on 2009-06-09
> UFO04553.5prime
CAGTCGACATGCATGTGGTGGGGGCACTGGTCAATCTGCTGCTGATCTTG
GCCTGCATTTACACGATGACCTCACTGACCCCGGCGGACCATCCGTATGC
CTTCCTGGCGGCATCCTTCAGCCTGGTCCACGGAGTGCTGGGCGTGGTTC
GCTCCTTTGCCAACGAGCCCGACGAGTGCGGACGCACCTTTATGATCTCA
GCCATCATACTGGAGGTTATCCCGCTGCCACTGGCGAACATCGAGTTCTA
CCTGGTATCCGATCAGTCGGGAGTGGCGCTGGTGCACGGCCTGTCGTTGA
TTCCACTGTTCTACGACATGATCGGCAAGATCAGCGAGGACTGGGACAGC
TCCACGGAGACGCTGATGGACCTCGCTCTGTTGGGCAACATCGGCTCCAC
GTTGTATCTGGCCATCAAGGACGGCAACCATATCTACTTCGGTGTGGCTG
CCACCGCGCTCCTCGCCAGATACGGCGGTGCAATTGTCGATAGCTGCAAC
GAGGGCCTTAGCAACGTTGTAGAGACTCTGGGAAACACCGGCATCCTGGC
CCTTATGACCTACGCACTCACTGAGGGCGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCCTCATCGCAGTACTGTTGTAA
TTCATTAACATTCTGCGACATGAGCCATCCCAAACGGCATGATGAACCTG
ATCGCACGCATCAGCACCTGTCGCCTTGCGTATAATATTTGCCTATGTGA
AACGAGTAATAATGTCCAATTGGTCCGTTTAATCAACTGGACCTACCCAG
GATGCTGAAGAAACATCCTATAACCTAAGATGGCA
UFO04553.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 759 | CG12679-RA | 131..700 | 9..578 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20375823..20376392 | 578..9 | 2850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:53:44 has no hits.
UFO04553.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:08 Download gff for
UFO04553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 123..705 | 1..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:48 Download gff for
UFO04553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 123..705 | 1..586 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:19 Download gff for
UFO04553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 123..705 | 1..586 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:19 Download gff for
UFO04553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20375818..20376400 | 1..586 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:48 Download gff for
UFO04553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20246845..20247427 | 1..586 | 98 | | Minus |
