UFO04555.5prime Sequence
1086 bp (976 high quality bases) assembled on 2009-06-09
> UFO04555.5prime
CAGTCGACATGACCTGCACATTGGTACTCCTGATTGCCAGCGTTCTGCAC
TTCCGAATGCGTGGCAGTTGTCTGCTGGACATAGAGCGTTTCCCGGTAAT
TCCCGGCACCATCTACGCCGGCCACATTGCCTACTGCGCCATCCTATACT
TCCTGCACGACCTGGAGATCCTGCCCACGCGCTATCGTAGCCGGATGGGC
TGGCTGACCACCTTCCTGATCGAACTGGTGTTGGGCGTGGCCTTCATGGA
GGTCCTGGCCCTGTGGCTCTGGTGCAGCGTGGAGCACATCCTCCACCTGT
CCACCCAGTTCGTGCTGCGCCGCTATCTGGGCGTCTCCACCGAAGTCTAC
CAGCGCTGGGAGTGGGCCATCATGGGTGGTCTGATGACCACGCTGGCAGC
CATGCTCTGGATAAACGCCTTCGAGGCCACGGAGACAACTAAAGCAGAGA
GGGTGTCGAAGGATGTCAAGGACATCCGGATGAAGGCGGTCCTGTGCCAG
CGGGAGGAGAAACAGAAGCAGGATCACGATCTGGAGAAGATTGAGCAGCC
TGCTCCAGAGCCAGAGGAGTCACAAAATCCTGATGAAGTGCAGCTGCCGG
AGAATCATCTAAAGCTGCTGGCCACCACCACTGATTGCGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATGAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTTCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGAGCCTTGTGCCTTGCGTATA
ATATTTGGCCATGGGGAAACGGGGCGAGAGTTGTCATATGGCACGTTAAT
CAAACTGGGGACTCCCCAGGATGCTGACGAAACCAT
UFO04555.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9570-RA | 1226 | CG9570-RA | 163..792 | 9..638 | 3150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20051456..20052085 | 9..638 | 3150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:51:46 has no hits.
UFO04555.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:13 Download gff for
UFO04555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 152..795 | 1..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:39 Download gff for
UFO04555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 152..795 | 1..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:08 Download gff for
UFO04555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9570-RA | 152..795 | 1..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:08 Download gff for
UFO04555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20051445..20052088 | 1..642 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:39 Download gff for
UFO04555.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19945478..19946121 | 1..642 | 99 | == | Plus |
