UFO04556.5prime Sequence
910 bp (902 high quality bases) assembled on 2009-06-09
> UFO04556.5prime
CAGTCGACATGAGAGCCTCTTTTCTGATCAGTCGCAAGCAGCCATGGATG
GGGCAGCTGCTGCTCATGGCGAGAAACAAAGCCCTTACGCTCCTGCTGAA
GCTGTATAGGCGGACTCCCATCTTCAGACCGCGACACCTGCCAGGAAGGA
ATCGGACTCAGAGCGTTGGACTTGCCCGGGATAATACGATCATGACCTCT
GCCAAAAATACGAACCCTTCCTGTCGTATTTCCCATCTCACCATGTTTGG
CGGACTCGTGCATCTGGATGTGCTAAGTGAGGACGACTACGTCTATGAGG
TCAGTGACATGGAAATCGGAGCGGACGGAGAAATTCTTCTGGACATGGAC
AGTCGGCGGAGACAGGGTAACTTCGAGCTGGCTCTAATGGCGGGCGGCCA
ACTGGACGTGGACTCCGAGGAAGACGAAGAATTCCACGAATGCGACTGCG
AAGGATATGTGCGGTGCGTGGAGTACGGGGAGTGTGAGGGGGGGAGCGAT
CTAGTGCGGACGGGTGGACGAATGGAGTCTTTGAAAAAATCTCAGCTGCC
TTCCGCGCCACCAGGTTCTTTTCACAAAGCGAGGCAACCTCCCCATCGCA
AGCTTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATAATCATATTCATAATCATAATCACAACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGGATTCTCACCAATAAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGGATC
TATCAAGAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGCCCTGCC
ACTCATCGCATGACTGGTGTAATTCATTAGCATTCTGCCGAAAGGAAACC
CTCACAAAGG
UFO04556.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11226-RA | 1103 | CG11226-RA | 79..666 | 9..597 | 2920 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22837146..22837733 | 9..597 | 2895 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:16:05 has no hits.
UFO04556.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:14 Download gff for
UFO04556.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 68..671 | 1..603 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:44 Download gff for
UFO04556.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 68..671 | 1..603 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:17 Download gff for
UFO04556.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11226-RA | 68..671 | 1..603 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:17 Download gff for
UFO04556.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22837135..22837738 | 1..603 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:44 Download gff for
UFO04556.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22830235..22830838 | 1..603 | 98 | | Plus |
