UFO04558.5prime Sequence
1101 bp (980 high quality bases) assembled on 2009-06-09
> UFO04558.5prime
CAGTCGACATGGATGACACATTATCAACGGTAGAAGGCGGGATGACGGAA
ACATCCTCATGGAGCACCACGATCGCCACCACCACCACTACAGAGGCCGC
CAAGGCGGGTAGCATGGCTGTCGGTATTATTGTCCTGATCGTTGTTATGG
TGCTCCTCTGCTGCCTGCTCATCATCTGCCTGCCGCTCCTCTGCCTGTGC
GGCTGTTGCGGACTCGCCTGCTCCGCGTGCCTCGCTTGCGACGAAGGATG
TTGTGGTGAAGGCGGCGGCGGTGGATGTTGCGGCGATGACGGCGGTGGAT
GTTGCGGCGATGGCGGCGGGTGTGGCGATTGTGGCGACGGCTGTGGGGAC
TGCACCTTGGACGATGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCCATAA
ACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGC
GATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCCCTCAAAGCGA
TGAAAACGTTTCAGTTTGCTCATGGAAACGGTGGAACAGGGGGAAACTAT
CCCATTACAGCTCACGCCTTCATGGCATACGAATCGATGAACATCCTCAG
CGGGCAGAATGTGATAAGCGAATAAACTTGTGCTTATTTTCTTACGGGCT
T
UFO04558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13494-RA | 604 | CG13494-RA | 73..433 | 8..368 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21954413..21954773 | 368..8 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:53:39 has no hits.
UFO04558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:30:43 Download gff for
UFO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 8..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:41 Download gff for
UFO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 8..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:14 Download gff for
UFO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 8..376 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:14 Download gff for
UFO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21954413..21954773 | 8..368 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:41 Download gff for
UFO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17841918..17842278 | 8..368 | 100 | | Minus |
