Clone UFO04561 Report

Search the DGRC for UFO04561

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:45
Well:61
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04561.5prime Sequence

1106 bp (1012 high quality bases) assembled on 2009-06-09

> UFO04561.5prime
CAGTCGACATGGAGTCTTCAAGCTGGCTCACGTGGTTGACCTTGGAAAAA
TGCGACAACTTATGGACGAAATCGCTTAAGATGCCGCTTCCTTGTAGGAA
AGGAGGATTGAGATCTTTTTTGAGTACTCATCTCAAAGGCGCAACGGAGT
GTGTTAACCGGATAGCCAGTGCCCCCGTGAGGAAACCTTGCTCGATAAAC
TGGCTGGGATCTGCATGGAAATGGATAGCTGGGAATCCCGACGCAGCTGA
CTGGAACACAATTCTGGCAACACAGAAGGTGCCCTTAAAGAATAGTGACC
AACAACTGAGGATTAACTCCAGACTCTTCGACGCCACCCACGAGTCAATT
ACGAATAAACGAGGCCATCGCAATAGTAATTGTCATGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGG
CATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTA
TAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGC
CACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGA
AAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTG
TATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCCATGGAAACGGT
GTAACAGGGTGAACACTATTCCCATATCACAGCCTCACCGTCTTTCATGC
TACGAACTCGATGACATCATCAGGCGGGCAGAAATGTGATAAGCGATAAC
TTGGCC

UFO04561.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:53:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5096246..5096623 386..9 1875 99.7 Minus
2R 25286936 2R 2795671..2795821 130..280 440 86.1 Plus
2R 25286936 2R 2864053..2864238 307..113 380 82.1 Minus
2R 25286936 2R 3564433..3564543 147..257 375 89.2 Plus
3L 28110227 3L 24122711..24122880 130..307 300 79.2 Plus
2R 25286936 2R 2795578..2795645 14..81 205 86.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:53:56 has no hits.

UFO04561.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:28 Download gff for UFO04561.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096627 1..386 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:28 Download gff for UFO04561.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 5096246..5096627 1..386 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:58 Download gff for UFO04561.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984132 1..386 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:58 Download gff for UFO04561.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 983751..984132 1..386 98   Minus