UFO04565.5prime Sequence
827 bp (827 high quality bases) assembled on 2009-06-09
> UFO04565.5prime
CAGTCGACATGAACACTTGTCGCTCATTGGCTCGAGGATTGAATATTTGC
AGTCCGCAATTAAGGCACTTGCTCGCCCAAAAACCATTCAACTCGGCTCG
TCTTCTGGCTACTAAAGCCCCAAAGGATCATAAGGCTAGTGGACCCACGA
CAATTGGACCTAGTGGCGATATCCTCGTTCCGCCTGTCACTTTGAAAGTG
ATACCCTTTCGTATGCCTCCCGATTTGCCTTATGACGATCGAAATATGCT
GCTTGGAAGACAGTTATCGCCACATTTGTCCATCTACAAAATTCAATTGA
CTTCCACCTTGTCCGCATTTCTACGAATTAGTGGGTTTGTTCTGGCCGTT
TTTGTTTGGTTCGTGGGAATCAGCGGCCTTTGCTCGCAAGGCGATATGGA
GGGATTTATAAAGAAAGTCGAAAAATGTGACTGCCACGGCATGGTGACGA
TGGCCAAGGTGATGGTGACCATGCCATTTGCCTACCATACAGTCGCCGGA
ACTCGACATTTGATCTGGTATTTGAACAAGTTTCTCACGATACCAGAGAT
CTATGCCACCGGCTATGTGGCTGTGGCTCTAACCATTGCTCTGTCTGCCT
TTTTGCTGGCCGTTAAAGTGGGCGAGAAGGTTAAGGAGGAGGTGGTAGAT
CTCACAAAACCAAAAAGGGTCAAAAAGGCTAAAAAAAGAGGCTCCGAAGG
ATGCGAAGAAAGATGCTCCCAAGGATACCAAAAAGGACCCAAGAAGGATG
CAAAGGACAAGAAGAAAGACGAGGAATGCAGTCTGCCAAAGCAAGCTTTC
TAGACCATTTCGTTTGGCGCGCGGGCC
UFO04565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6629-RA | 983 | CG6629-RA | 110..892 | 9..790 | 3770 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11114762..11115534 | 790..19 | 3600 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:53:48 has no hits.
UFO04565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:22 Download gff for
UFO04565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 9..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:53 Download gff for
UFO04565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 9..790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:24 Download gff for
UFO04565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 9..790 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:24 Download gff for
UFO04565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11114762..11115534 | 19..790 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:53 Download gff for
UFO04565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6940484..6941256 | 19..790 | 99 | | Minus |
