UFO04566.5prime Sequence
905 bp (905 high quality bases) assembled on 2009-06-09
> UFO04566.5prime
CAGTCGACATGTCCTTTCACCGGATCAATGTCAAACAAGCTTCCATAGCC
GCCCGCCAGCGGCAGTCGCGGACGACCAGGATGACCCGGCACACCATTTT
CAATTTGAAGAGACCCATTACCTTCCAGGTGCGCAAATCGCTGGTGGAGT
ACGTGGACATGGAGCTAGCGGACATGGACACCTCCGTGTTCTATCAGCGC
ATCTTTATCCTGGCCAAGAACTGCCACTTGACGCCAGTTGTGTCCAACGA
GGAGTTGCTCGCCGACGCGGTGGTGGAACAGGCTGAGCCTGAACCAGATG
AAGCGGCGCCCATACAGTTCATGGAGGATGTGATCTTCGACAACACTGAA
ACGGAATCGCCCATGAACACGACGGCGGATCCAGCGCCCATTCCTGCGCC
GGAAGAAGGTGCGACGGAAGCTGCAGAAGTAGTTACCCACATGTTCCGTT
TCAGTGAAGACGATCCAGAAGAAGACTTTGTCGAAGAGGAGGAACTGGAA
ATGGACACCCAAGCACCCGATCAGCCCAAGGACTTCTTTGCCATCTTCAG
CGAGCGCCTGCAGGAGCTGCATAAGCAGTGCAAGGCGCTGGCCATCACGC
CGGATCCCATGTGCGGATTGTTTCTCCACATGGGCGAATACAGCATGCTG
ATGCTGGAGTCCTCCGAGGACATGATCGGATGCTTCACACGGGCCCTGGC
CGATTGCTGTGAGACTTTCTGGTTGATGAATCGCGTCTTCCAGATCGAGG
ATCACGTGCAGGAGCTCTATACAAAGAACTTATGTTTCGCCGCATCCCTT
CCGTCTTTCTGAGCGAGAAGTTCCCCAACCTCCACGCCCACCGATGAGTA
TCTCATGGGAAACAGCATCTGATCATCAAGGATAGCTGCTGACCATCTGC
CGGCT
UFO04566.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15878-RA | 1631 | CG15878-RA | 116..1014 | 9..905 | 4325 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2211490..2212388 | 905..9 | 4225 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:08 has no hits.
UFO04566.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:22 Download gff for
UFO04566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 108..1014 | 1..905 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:05 Download gff for
UFO04566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 108..1014 | 1..905 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:06 Download gff for
UFO04566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 108..1014 | 1..905 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:06 Download gff for
UFO04566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2211490..2212395 | 1..905 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:05 Download gff for
UFO04566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2211490..2212395 | 1..905 | 98 | | Minus |
