UFO04569.5prime Sequence
1021 bp (894 high quality bases) assembled on 2009-06-09
> UFO04569.5prime
CAGTCGACATGTACGATGCAAGATTCCCAATGCGTTGCGACTCCCTGGTT
ACGATGTTGCTTCTTTCGAACATCCTGCTGTCGACCGCCGCGCATCCTGC
CCAGCGGAATGATCCGCGTTTCAAGCCCGGCTCCCTTCCCTGCAAGACGA
GCATGAAAGCCAGCCAGGTGGCCTCGAAGGCGGCCAAGGATGCGAAGGAC
GCCAAGGATGCGCAGCCATGTGCCGCGGAGATGGCGGGCTACAGGGCACG
GGAAATGCTGGCGGACAGGGCGTTGCAGGCGGCCAAGGCTGCGGAGGCGG
CTCTCAACGGGAAGAAGCAGCTCCTCGATGAATACACCAAAAGTCTGGCA
GAAACGAACAGGGTTATCGAGGAAATCCAACGAGCCATTGCTGCCAGCTC
GTGCTCGGCGACGTCGGCAAAGGGGATCCGTGACAAGCTCTGCACATCCG
TGAACATTATGAAGAGTATGCTAAAGGAAATGGGCGGAAATCTCGATAAC
ATCCGGAGGATGGCCGACAGTGCCCAGAAAGAGGCCCTGGAAAAGCGCAG
CCTTCTGAAAGCGGCCAGGATGCGGGTGGAAGAGCTCCATAGCTGCATGT
GCGAGGCTCAGAAGGATCTGGAGCGAAATAAGCAGAGCGCTAAGAAAGCC
AACGACGCCGCCAAGGAAGCACAGCAACGGATCGAAGCCTTGCAAAAACT
GGTGAGCAGATTAAGATGCTGAAGCGAAAGGATCTTCAGTCGCTCGAGAA
CTTCCTGCGCAGAGAGAGTAGCACTCCGGAAAAACAAGTGCAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATATCAT
AATCATAATCATAATCCCACTAGCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATCTCCCCAATAAAAAACGCCGGCGCACGAGCGTTCTGAACAATCG
AAGGAGTTCTGAGTCATACTGGATCTATCAACAGGAGTTCAAGCGAGCTC
GAATCAATAGCCCGCCTGCCA
UFO04569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11698-RA | 910 | CG11698-RA | 57..842 | 9..789 | 3775 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8312244..8312998 | 9..762 | 3695 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:57 has no hits.
UFO04569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:23 Download gff for
UFO04569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 22..816 | 9..799 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:59 Download gff for
UFO04569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 9..799 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:10 Download gff for
UFO04569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11698-RA | 57..851 | 9..799 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:10 Download gff for
UFO04569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8312244..8313038 | 9..799 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:59 Download gff for
UFO04569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4137966..4138760 | 9..799 | 98 | == | Plus |
