UFO04571.5prime Sequence
1099 bp (957 high quality bases) assembled on 2009-06-09
> UFO04571.5prime
CAGTCCCCTTGGAGAAAATCGAGAAGGAACTTGAGCGCACGGAGCAGCAG
CAGCAGGAGCCGACGGACCCCTCCAATGGCAATCTGGAGGAGCAAGTCCG
CAAGCTCAGGGATCACAATTTGCGGGTGAAGCATCTGAATACTCAGCGTC
GTCGCATCCTACGCCTGTTGCAGGGAAAGATGCTGCAGTATGCCACCCTG
GAGGAACGTTTGCACAGGATTGGCGAACTCGTTCTCATCGCAGAGCTCCA
TTCGGGTGTGAAGACACTCAATCAGCGTCTGGACAGAATGGTGGAGAATT
CAACTTGCTCCATTTGCCTGTTGCCCTGGACGGACAACGGAATACATCGC
CTGGTCTCGCTCCGTTGTGGCCATTTGTTTGGCTCCAGCTGCATCCACAT
GGCCATTCGGCGCAATCATCGCTGCCCAATCTGCCGGCGACGGGCTCGCC
ACTTCCACGTGCGCAGGATCTACAGTCCGAGCTTTTTGTCTCATGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAACGGGGGCGAAGAAGTTGTCAT
ATTGGCCACGTTTAAATCAAACTGGTGAACCCACCCAGGATGGCTGAGAC
GAAAACATATTTCTCATTAAACCCTTTAGGGAAATAGGCAGGTTTCACGT
AACACGCCCACATCTGCGAATATATGTGTGAGAAACTGCGCGGAATCGTC
TTGTAATTCACTCACCGATGAACGGTTCAGTTTGTCTCATGGAACGGTT
UFO04571.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17329-RA | 665 | CG17329-RA | 60..544 | 10..494 | 2395 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16291343..16291827 | 10..494 | 2395 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:51:57 has no hits.
UFO04571.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:16 Download gff for
UFO04571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 60..549 | 10..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:46 Download gff for
UFO04571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 60..549 | 10..502 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:13 Download gff for
UFO04571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17329-RA | 60..549 | 10..502 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:13 Download gff for
UFO04571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16291343..16291827 | 10..494 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:46 Download gff for
UFO04571.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16291343..16291827 | 10..494 | 99 | == | Plus |
