UFO04572.5prime Sequence
1105 bp (978 high quality bases) assembled on 2009-06-09
> UFO04572.5prime
CAGTCGACATGCTCATTCCAGAGGTGGACATGTGGAATGTGTCCAAGAGT
AGCCGGATACACCGCCTTTCCATCTTCAATTGCGATAAGCCTGGACTGAA
AGTGTTGGACTACGCCGCAGTCCGGGGAGTTGATAGGTTCTACTTGGAGT
GCCAGGACTACAGGGATTATTTCAAAGACCCCTATAATCGAGTCCACAAG
CCGATAAGGTTCACCTCGTATGCGGGCAAGTGCGACGTTAAGTTGGATAC
CGACGTTGAGGTCCTTTCTGAGCCGACCTTGTGGCGTATTGATCGCCAGC
CCATCGTCTATCCGATCGACTATCACTCGGATATGGCACTGGGTAGACGG
GACTGCGATCACATTAAAGCCTTTTGTTCGCCAGCTGAGAGCCTAAGCTT
CAAGCGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCA
CCCAGGGATTGGCTGAGACGAAAAACATATTCTCATAAACCCTTTAAGGA
AATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATATATGTTGT
AGAAACTGCGGAAATCGTCGTGTTATTCACTCCAGAGCCGATGAAAAACG
TTCAGTTGCTCATGGAAAACGGTGTAACAGGGTGAACCTATCCATATCAC
CAGCCTCACCGTCTTTCTTGCAACCGAAATCGATGAACATCATCAGGCGG
CCAGA
UFO04572.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13110-RA | 527 | CG13110-RA | 79..477 | 9..407 | 1935 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9350548..9350946 | 9..407 | 1935 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:28:16 has no hits.
UFO04572.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:17 Download gff for
UFO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13110-RA | 72..476 | 9..415 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:48 Download gff for
UFO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13110-RA | 79..483 | 9..415 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:50 Download gff for
UFO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13110-RA | 79..483 | 9..415 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:50 Download gff for
UFO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9350548..9350946 | 9..407 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:48 Download gff for
UFO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9350548..9350946 | 9..407 | 98 | == | Plus |
