UFO04581.5prime Sequence
1130 bp (992 high quality bases) assembled on 2009-06-09
> UFO04581.5prime
CAGTCGACATGAACGTACCACTCGTAGCCCTCACCAAGGATCCCAAGATG
AAGAAGTCACAGAAGAAGTCATCAATGGTGGCCGTTCCCAAGATGTCGCA
GAAACCACAGAAGGCAGCACGTCTATTTCAGCCAAAGGTGGAGAACAAGA
TTACTTTGACCACTCCATTGACTGCACCCAAAAAGGAACGGGTGAAGGAC
ATCAAGGTGGCAGATCCTCTTGAGAAGGAAGTAGAGTCAGTATTCGTTAC
AGTACCGAAAAACAAACTTTGCAAAACCAGACGCAATCGTCCTGGTGACC
GACTCTTTGATCGCCGTTCCGGATCGAAACGCACTGGCGTAAAGGCGGTG
GAAAAACGCAATGGAGCCGGGGCCCACAACTGGGGATCCATCCAGCAGGA
GATCGACTTGCGTCAGAGGACCAATTTGCGCACCTTCGAAGGGATGAAGT
TACCAAAGGTATCGAGTTTCGTCTACGAGTACGATTCATCGGAGGAGACC
GAACAATATACACTCGACGAGTGGCGTGCCATGCAGGCGCAGAAAAAGCA
GGTTTTGAATAAGTTTATAATGTCTGATTTCGGTACAAAGAAAGAAGTAA
CAGGGGGTTCTGAAGAAACTGTACGAGCCGAGGGATCAGGAGACACAGAC
GACACCAAAGGATTGGACAAAACAGGAGGAACTGAACAAACAGGAAATAC
TGAAACAGGGGGAGAGGTCTGCTGGATCTGGAGAAACAGAAACAGCCGCA
GCATCTGGAGTACCTGACGCATCTGGAGGATCTGGAGGAACTGAGGGATC
TGGAGGATTAGGAGGATCAGGAGAGCTGGAAGACGATGGCGAAGATCAAC
CGCTGACCGCCCGTTGTACGTTGTTGATATCCTGTTAAATTTCAACACTG
ATCAAGGGTTATTCCTTATCGCTTAAAATTCATTGCAAGCTTTCTAGACC
ATCCGTTTGGCGCGCGGGCCAAGGTAAGTGGTCATATCATAATCATATCA
TAATCATATCACCAACTAGCCTAGGAGATTCTTGTCAATGACTAGTGGCT
TGGAATTCTTCAACAATTAAAACCCCCCGCCCGCCACCGAAGCGTTCTGA
ACAAATCCCGATGGAAGTCTGGAGTTCATT
UFO04581.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPYR1-RA | 1055 | CG15031-RA | 77..1003 | 9..934 | 4535 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15243911..15244837 | 934..9 | 4460 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:48:45 has no hits.
UFO04581.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:30 Download gff for
UFO04581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 1..943 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:45 Download gff for
UFO04581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 1..943 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:33 Download gff for
UFO04581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 1..943 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:33 Download gff for
UFO04581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15243911..15244841 | 1..934 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:45 Download gff for
UFO04581.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15137944..15138874 | 1..934 | 99 | | Minus |
