Clone UFO04590 Report

Search the DGRC for UFO04590

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:45
Well:90
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG17991-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04590.5prime Sequence

818 bp (721 high quality bases) assembled on 2009-06-09

> UFO04590.5prime
CAGTCGACATGGCTAGCAACGTTGCTGCGCCACAAGCTTCAGCTGGAGGA
GATTCGACGGAACTGGAGCGCTGTTGCTGGATCTGTTTTGAGACCGATAA
GGAGGCAGGTCGCCAGGCTTGGGTGAATCCATGTCTCTGCCGAGGAACCA
ATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACGAGAAGACC
CGAATAAACAACAATCTGCAAGCCGTTTCCTGTCCACAATGCCAAACGGA
GTACACCATTGCATACCCGAATCTCTGGATTTTCGATAGGGCTTTGGAGC
TGACCAACGATCTTATCCTAACAAACTTATATAATTGCCTGGCCAATGTC
TTCACTGTGGTCTTTGCCTATTGGTCAGCGGTTTCATTCGGAGCAAAAAC
ATATTTGCAGATCACTGGTCAGGAAGGTCACGTTCATCAAATAATTCAAT
CGGGAGACCTGTTGGTTGTTCTGGTCGGATTCCCATTAATCTCGGTAGTT
CTGATACTTGGACGCTTAATTCCCTGGGAAGATGCCCTGTTGCGCTTCAT
TAGAATATGTTATTCATTGCTGCGAAGTCTTTCAATGATGTGCCTAGGAC
GGAAATATGACCACCAGACCGAACCATACCCTTCTGCACCAATGACCGAA
TTCGACCGTGCGGACTCCTGCAAACTGCTGAATCTCGCGAAAGCATTTGG
TGTCAAAGCCAGCATCATGAACTGCAAAAAAATATTGGCAGAAAAAACAG
ATTCACGAGAATGTACACCTTAAACCTAATAATCTTGTAGGGGAGAGAGA
GACGATAAAATTTCACAT

UFO04590.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17991-RA 1064 CG17991-RA 66..708 9..651 3185 99.7 Plus
CG9855-RC 1718 CG9855-RC 355..549 65..259 210 75.1 Plus
CG9855-RA 1533 CG9855-RA 355..549 65..259 210 75.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27241332..27241974 9..651 3185 99.7 Plus
3R 32079331 3R 4397260..4397454 259..65 210 73.8 Minus
Blast to na_te.dros performed on 2014-11-28 23:16:14 has no hits.

UFO04590.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:35 Download gff for UFO04590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 61..708 1..651 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:09 Download gff for UFO04590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 61..708 1..651 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:09 Download gff for UFO04590.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17991-RA 61..708 1..651 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:09 Download gff for UFO04590.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27241327..27241974 1..651 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:09 Download gff for UFO04590.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23067049..23067696 1..651 99 == Plus