UFO04590.5prime Sequence
818 bp (721 high quality bases) assembled on 2009-06-09
> UFO04590.5prime
CAGTCGACATGGCTAGCAACGTTGCTGCGCCACAAGCTTCAGCTGGAGGA
GATTCGACGGAACTGGAGCGCTGTTGCTGGATCTGTTTTGAGACCGATAA
GGAGGCAGGTCGCCAGGCTTGGGTGAATCCATGTCTCTGCCGAGGAACCA
ATAAGTGGGTGCACCAGAGCTGCATTTCCCTCTGGATCGACGAGAAGACC
CGAATAAACAACAATCTGCAAGCCGTTTCCTGTCCACAATGCCAAACGGA
GTACACCATTGCATACCCGAATCTCTGGATTTTCGATAGGGCTTTGGAGC
TGACCAACGATCTTATCCTAACAAACTTATATAATTGCCTGGCCAATGTC
TTCACTGTGGTCTTTGCCTATTGGTCAGCGGTTTCATTCGGAGCAAAAAC
ATATTTGCAGATCACTGGTCAGGAAGGTCACGTTCATCAAATAATTCAAT
CGGGAGACCTGTTGGTTGTTCTGGTCGGATTCCCATTAATCTCGGTAGTT
CTGATACTTGGACGCTTAATTCCCTGGGAAGATGCCCTGTTGCGCTTCAT
TAGAATATGTTATTCATTGCTGCGAAGTCTTTCAATGATGTGCCTAGGAC
GGAAATATGACCACCAGACCGAACCATACCCTTCTGCACCAATGACCGAA
TTCGACCGTGCGGACTCCTGCAAACTGCTGAATCTCGCGAAAGCATTTGG
TGTCAAAGCCAGCATCATGAACTGCAAAAAAATATTGGCAGAAAAAACAG
ATTCACGAGAATGTACACCTTAAACCTAATAATCTTGTAGGGGAGAGAGA
GACGATAAAATTTCACAT
UFO04590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17991-RA | 1064 | CG17991-RA | 66..708 | 9..651 | 3185 | 99.7 | Plus |
CG9855-RC | 1718 | CG9855-RC | 355..549 | 65..259 | 210 | 75.1 | Plus |
CG9855-RA | 1533 | CG9855-RA | 355..549 | 65..259 | 210 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27241332..27241974 | 9..651 | 3185 | 99.7 | Plus |
3R | 32079331 | 3R | 4397260..4397454 | 259..65 | 210 | 73.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:16:14 has no hits.
UFO04590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:35 Download gff for
UFO04590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17991-RA | 61..708 | 1..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:09 Download gff for
UFO04590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17991-RA | 61..708 | 1..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:09 Download gff for
UFO04590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17991-RA | 61..708 | 1..651 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:09 Download gff for
UFO04590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27241327..27241974 | 1..651 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:09 Download gff for
UFO04590.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23067049..23067696 | 1..651 | 99 | == | Plus |