UFO04595.5prime Sequence
622 bp (550 high quality bases) assembled on 2009-06-09
> UFO04595.5prime
CAGTCGACATGGCCGAGGAGATAGAGGTTGAGGAGACGGAGGACTTCCAC
GACATGGACTTCAATGACGAAGAGCCATCCTGTAGTGGAGGAGCTGTCCA
GGCCAGGACGGAGCGCTTTGTGGTGAAGAAATGGGTTGCGCACGCCATGT
GGGGATGGGACGTAGCAGTGGACAACTGTGCCATCTGCCGTAACCACATC
ATGAACCTGTGCATCGAGTGCCAGGCGGACCCGAATGCAAACCAAGACGA
GTGCACTGTGGCTTGGGGCGAGTGCAACCACGCATTCCATTACCACTGCA
TCGCGCGCTGGTTGAAAACGCGCCTGGTCTGTCCGCTGGACAACAAGGAG
TGGGTCTACCAGAAGTACGGCCGCGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAAACGCCCGGCGGCAACCGAGCGTTCTGACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATTTTCAACAGGAGTCCAGGGAGCCCGAA
ATCAAATAAGGCCGCCTGGCAT
UFO04595.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdc5-RB | 3219 | CG6905-RB | 2674..3040 | 374..8 | 1835 | 100 | Minus |
| Cdc5-RA | 3346 | CG6905-RA | 2801..3167 | 374..8 | 1835 | 100 | Minus |
| Roc1b-RA | 506 | CG16988-RA | 50..416 | 8..374 | 1835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 358030..358396 | 8..374 | 1835 | 100 | Plus |
| X | 23542271 | X | 647711..647918 | 168..372 | 405 | 80.8 | Plus |
Blast to na_te.dros performed 2014-11-28 19:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3292..3349 | 617..559 | 112 | 67.8 | Minus |
UFO04595.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:32 Download gff for
UFO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6905-RA | 2797..3170 | 1..380 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:56:23 Download gff for
UFO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Roc1b-RA | 45..420 | 1..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:37 Download gff for
UFO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Roc1b-RA | 45..420 | 1..380 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:37 Download gff for
UFO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 358025..358400 | 1..380 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:56:23 Download gff for
UFO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 358025..358400 | 1..380 | 98 | == | Plus |
