UFO04610.5prime Sequence
1079 bp (995 high quality bases) assembled on 2009-06-30
> UFO04610.5prime
CAGTCGACATGGCGACCCGTTCTGAAGAGACGGTCCGTTCACTGGCGCAT
TGGCAATTTTTGGCTGGCGGATTGTCGGGCTTCATCGAGATTATCTGCTT
TCATCCCCTCGATGTGGTTAAGACCCGGATGCAGATACAGGGTGCCCATC
CATTTGGCGGCGAGGTTGTTTACACCTGTCCTCTGGATGCCATCGTCAAA
ATATATCGCTACGAAGGGTTGTCTTCCCTATGGAAGGGTATTGTGCCCCC
GATCTGCGTGGAAACTCCAAAGAGGGGCGGCAAGTTTTTGATGTACGAGA
GCCTTAAACCGTACTTCCAGTTTGGAGCCCCTCAACCAACTCCGCTGACC
CACGCCATGTCCGGTTCAATGGCCGCAATTCTGGAGTCCTTTCTCGTCAA
TCCCTTTGAGGTGGTCAAGATCACTCAGCAGGCTCATCGGGGGAAACGCT
TGAAAACACTGTCGGTCGTAAAGTACATAATCAAGCATGATGGCTATGGC
ATCAAAGGGTTGTATCGGGGTATCACTGCACTAGTGGCTCGAAATGCCGT
CTTTCACTTTGGATTCTTTGGTTTTTACAATGCGCTTAAAGACATTGTTC
CAAGCCCGGAGGATAAGACATACAACATCCTGCGAAAGGTCATCATAGCT
GGGTTGGCCAGTTCCCTGGCTTGCGTGATGAGTGTTACTTTGGATATGGC
CAAGTGCAGGATTCAAGGACCCCAGCCAGTGAAGGGCGAGGTGAAGTACC
AGTGGACCATAAGCACGATTAAATCAACCTTCAAGGAGGAGGGTTTTCGA
TCGTTGTTCAAGGGTCTGGGGGCGATGATCCTGCGTGTCGGCCCTGGTGG
GGCCATGCTCCTGTGACCTACGAGTATTATTTGAATTTCTTAGAGCCAAA
TATTGCAGCTTTCTAGACATTCGTTGGCGCGCGGGCCCAGTAGTGTCATA
ATCATATCATATCAATAATCATAATCACACTAGCCTAGAGATCCTGTCAT
GAACTAGTGGCCTGATTCCCACAATAAAAACGCCCCGGCCGCCATCGACG
TCTGACAGTTCGATGGGAGTTGAGTCTTC
UFO04610.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9582-RB | 1287 | CG9582-RB | 241..1135 | 9..900 | 4370 | 99.4 | Plus |
| CG9582-RA | 983 | CG9582-RA | 67..961 | 9..900 | 4370 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9024481..9025366 | 892..9 | 4300 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:26:28 has no hits.
UFO04610.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:34:55 Download gff for
UFO04610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9582-RA | 33..938 | 1..904 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:24 Download gff for
UFO04610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9582-RA | 61..966 | 1..904 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:44 Download gff for
UFO04610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9582-RA | 61..966 | 1..904 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:44 Download gff for
UFO04610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9024496..9025372 | 1..878 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:24 Download gff for
UFO04610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9024496..9025372 | 1..878 | 99 | | Minus |
