UFO04618.5prime Sequence
1118 bp (1024 high quality bases) assembled on 2009-06-30
> UFO04618.5prime
CAGTCGACATGGAAAACTTCAGGACCTCGAATAATTCTGGAGTATCACAG
CGAATCCATAACACCGGGCCCACTCCCGTACTCGCGCCCTCCGGATTAAG
ATCCCGCTTACTCAGCGGTTCCTCTGAGCGGAATCCAAATGAGTATTACG
GAGACTCGGACTCCTCAAGCAGCAGCAGATCTATCGACAGAACCCCATTC
CTGTTGGAGTATTCCAGCGACTCAGAGTCGTCTAGTTCCAGTGATAGTGA
AAGCTCATCGACCAGCATTAGCTTCGATAGCAGTATGAGCTCCACCGAAT
CATCAACACCAATGGGACATACAGAATCCTCAGATTCAAACGAGGATTCT
CCTCCCAACAAACGGATCAAATCAGATGACGAGGAGTCCAAGAAATCTGT
CTTGCCCTACAACTGCCCTGTGTGCCTGGAAGATGTCCGCGAGAAGCTAC
CAGTGTCCACCAATTGTGGCCACGTTTTCTGCAAAGCGTGCATTAAGAGA
GCTGTCGACACTGGCAGGGTATGCCCATTGTGCGGAGTGGATGAGCCCGA
ATTCCATCGTATTTTCTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTT
CTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATC
AAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA
GCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATC
GCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGA
AACGGGGCGAAGAAGTGTCCATATTGCACGTTTAAATCAAACTGTGAAAC
TCACCCAGGATGGCTGAAACGAAAAACATATCTCAATAAACCCTTTAGGA
AATAGCAGTTTCACGGTAACACGCCCAATCTGCCAATATATTGTGGTAGA
ACTGGCGGAATCTCTGGA
UFO04618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-RC | 1376 | CG15150-RC | 226..786 | 9..569 | 2805 | 100 | Plus |
| elfless-RB | 1643 | CG15150-RB | 226..786 | 9..569 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18010500..18010866 | 569..203 | 1835 | 100 | Minus |
| 2L | 23513712 | 2L | 18011077..18011194 | 126..9 | 590 | 100 | Minus |
| 2L | 23513712 | 2L | 18010934..18011011 | 203..126 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:15 has no hits.
UFO04618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:33:16 Download gff for
UFO04618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RA | 10..580 | 1..574 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:12 Download gff for
UFO04618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 220..790 | 1..574 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:22 Download gff for
UFO04618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 220..790 | 1..574 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:22 Download gff for
UFO04618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18010496..18010865 | 204..574 | 99 | <- | Minus |
| 2L | 18010934..18011011 | 126..203 | 100 | <- | Minus |
| 2L | 18011078..18011200 | 1..125 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:12 Download gff for
UFO04618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18010496..18010865 | 204..574 | 99 | <- | Minus |
| arm_2L | 18010934..18011011 | 126..203 | 100 | <- | Minus |
| arm_2L | 18011078..18011200 | 1..125 | 96 | | Minus |
