UFO04622.5prime Sequence
1138 bp (1020 high quality bases) assembled on 2009-06-30
> UFO04622.5prime
CAGTCGACATGGCGTACAGCATCGAAAAGAAATCCATACCCGGCTACATG
ATGTACATCAATGGCGGTCTGGCCGGAATGCTGGGCACCTGCATTGTGCA
GCCATTGGATTTGGTGAAGACCAGGATGCAGATATCAGCCACGACGGGCG
AGTACAAGAGCTCCTTCGATTGCCTGCTAAAGGTTTTTAAAAACGAGGGC
ATACTTGCGTTGTATAATGGATTGAGTGCGGGATTGATGCGACAGGCCAC
GTACACGACAGCCCGAATGGGTTTCTACCAAATGGAGATCGACGCCTATC
GCAAGCAGTTCAATGCACCGCCCACTGTGTTGGCCAGCATGGGTATGGGC
ATTCTGGCCGGTGCTTTCGGTGCCATGTTCGGCAATCCGGCGGAGGTGGC
CCTCATCCGGATGATGTCCGATAACCGATTGCCGCCGGCGGAGAGGCGAA
ACTACACGGGTGTTTTGAACGCCTTTGTGCGGATCGTCAAGGACGAGGGC
GTGATCACCCTCTGGAAAGGATGCATGCCCACTGTGGGTCGGGCCATGAT
CGTCAACATGGTTCAGCTGGCCTCGTACTCGCAGTTAAAGGCAGCATTTT
CGGAATACTTTTCGGGACTTTCGCTTCACATCGCTGCCGCCATGATGTCC
GGTCTATTGACCACCATTGCCTCAATGCCACTGGACATGGCCAAAACGCG
CATCCAGCAGCAAAAGACGGCCGAGTACAAGGGCACCATGGATGTCCTGA
TGAAGGTCTCCAAGAATGAGGGTATCGCCTCCCTATGGAAGGGCTTCACG
CCCTATTTGTGTCGCTTAGACCGCACACGGTGTTTGCCTTTATATTCCTG
GAACAACTCACCAAGGCCTACAAGCACATTGTGCTCGGCGACGATTCTGA
ATCGAACATCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCCTATCCCCACTAGCCCT
AGGAGATCCCTGGTCATGACTATTGCCTGGATCTCCACAATAAAACGCCC
CGGCGGCACGAGCGTTCTTGAACAAATCCGATGGAAGTTCTGAAGTCATT
TACTGGATCTATTCACGGATCAAGCCAGCTCGAATTCA
UFO04622.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7514-RA | 1188 | CG7514-RA | 73..976 | 8..910 | 4330 | 98.7 | Plus |
| CG18418-RA | 1142 | CG18418-RA | 152..798 | 73..710 | 675 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4687799..4688702 | 910..8 | 4305 | 98.7 | Minus |
| 3L | 28110227 | 3L | 4689412..4689919 | 574..73 | 600 | 75 | Minus |
| 3L | 28110227 | 3L | 4689273..4689347 | 710..636 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:43 has no hits.
UFO04622.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:35:02 Download gff for
UFO04622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 66..983 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:55 Download gff for
UFO04622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 66..983 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:33 Download gff for
UFO04622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 66..983 | 1..919 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:33 Download gff for
UFO04622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4687791..4688708 | 1..919 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:55 Download gff for
UFO04622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4687791..4688708 | 1..919 | 98 | | Minus |
