UFO04628.5prime Sequence
778 bp (663 high quality bases) assembled on 2009-06-30
> UFO04628.5prime
CAGTCGACATGGCCAAAAAGGAGGAGCCTCTTATGGACGGACCCAAGCGG
ATGAACCGCGAATTGGCCCTGATGTTGGAGGATAAACAGAATTTGCAGTT
CCGAAACCTCTTGGTGGAGCCGAACAACATCTACAAGTGGACAGGCCTGC
TGATGCCGGTGGCACCGCCTTATGACAAGGGTGCCTACAAAATGGAGATC
GACTTTCCACTGGATTACCCATTCAAGCCGCCTCGCATCCATATAAACAC
GAGGATGTACCACCTGAATGTCAATGAGCGTGGTCAGGTGTGTGTGCCTA
TTTTGGAGGTCGAGCACTGGATCCCAACCACGCGGATTGACCAGGTGCTG
CAGGTACTGCTGGCCACCATAAATGATCCACAGCCGGAGAACGCCTGGCA
CATCGAAATGGCCGGCGAGTATCGCAATGATCCGGTGCGATTCTTCAAAA
TGGCCGATGCCTGTGTGCAGAAGTACAGTGAACCCCGGCCCACTGAAGAG
GAGCTAGCAAAGTTTGCGCGCAAGCGAAAGAAAGCGATGACGAAGAACGC
AAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATA
ATCATATCATAATCATATCATATCACACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGATTCTCACAATAAAAACGGCCCGGCGCACGAGCGTCTG
AACAATCAGATGGAGTTCTTGAGTCATACTGATCTATCACAGGAGTCAGC
GAGCTCGATATTCATACCCCCCGCCTTG
UFO04628.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17030-RA | 767 | CG17030-RA | 132..671 | 8..547 | 2655 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4980099..4980638 | 547..8 | 2655 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:16:24 has no hits.
UFO04628.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:31:40 Download gff for
UFO04628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 124..671 | 1..547 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:58 Download gff for
UFO04628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 124..671 | 1..547 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:27 Download gff for
UFO04628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17030-RA | 124..671 | 1..547 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:27 Download gff for
UFO04628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4980099..4980641 | 1..547 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:58 Download gff for
UFO04628.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4980099..4980641 | 1..547 | 98 | | Minus |
